Corynebacterium ulcerans 809: CULC809_00367
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Entry
CULC809_00367 CDS
T01880
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cuc
Corynebacterium ulcerans 809
Pathway
cuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CULC809_00367 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuc03021
]
CULC809_00367 (rpoC)
03400 DNA repair and recombination proteins [BR:
cuc03400
]
CULC809_00367 (rpoC)
Enzymes [BR:
cuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CULC809_00367 (rpoC)
Transcription machinery [BR:
cuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CULC809_00367 (rpoC)
DNA repair and recombination proteins [BR:
cuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CULC809_00367 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEG80907
LinkDB
All DBs
Position
409242..413009
Genome browser
AA seq
1255 aa
AA seq
DB search
MTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITGVDE
EARHSDQTTLEAEMLLEKKDVEADAESEIAERAQKLEEDLAELEAAGAKADARNKVQKAA
DKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAI
QTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIP
PELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDLGAPEIIVNNEKRMLQESVDAL
FDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHEC
GLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRA
PTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLA
SNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEDEIGGQGAYQPATETGPATGVYSSYAE
ALMARDRGVLGLQAKIQVRISHLRPPTDVEAEQFPEGWEQGQTWLADTTLGRIMFNELLP
WNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTI
TMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERERYDRLVELWKEATDEVGNAVE
KLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYF
NNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPLAVEVKDAQG
NVTGYTGHSLIETSVAGRVASVDVKDSEGNVLVPAGDNLTDQLIEKLIAAGIAEVKVRSV
LTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDIT
GGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTLTINPDDGSDVVVYEKLSKRQG
LATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQ
DVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGTLVDLSEAKAANAEAIAAGGQ
PAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIP
AGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGASVPLDEAYDL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtccaaggttcgtcgtgagcgcatgggccacatcgagctggctgcgcctgtg
acccacatttggtacttcaagggcgttccttctcgcctcggctacctattggacctggct
ccaaaggaccttgagcgcatcatctactttgctgccaacatcatcactggcgttgacgag
gaagctcgccacagcgaccagaccactcttgaggcagaaatgcttttggagaagaaggac
gttgaggctgacgcagagtctgagatcgcagagcgcgctcagaagctagaggaagacctc
gctgagcttgaagcagcaggcgcaaaggctgacgctcgcaacaaggtgcaaaaggctgca
gacaaagagatgcagcacatccgcgagcgtgctgagcgtgagatcgaccgtcttgaggag
atctggcagacctttatcaagcttgctcctaagcagatgatcatcgacgagaccatctat
gaagagctcgttgatcgctacgaggattacttcaccggtggtatgggcgcggaggctatc
caaacccttatccgcaacttcgacctcgacgctgaggcagaagagctgcgagagatcatc
aacaacggcaagggccagaagaagatgcgtgctctcaagcgcctcaaggtcgttgctgca
ttccagcgctcgggcaatgacccagctggcatggtgctcgactgcattccggtgatcccg
ccggagctgcgcccgatggttcagcttgatggtggccgttttgctacctccgacctgaac
gacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatcttggt
gctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcgcta
ttcgacaacggccgtcgtggtcgccccgtcactggtcctggtaaccgtcctctgaagtcc
ctgagcgatctgctcaagggtaagcagggtcgtttccgtcagaacctgctgggtaagcgt
gtcgattactctggtcgttccgttattatcgttggtccacagctgaagctgcatgagtgc
ggtcttcctaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctcgtg
gaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgccct
gaggtgtgggacgttctggaagaggcaatttccgagcatcctgtgatgcttaaccgtgca
cctaccctgcaccgcctaggtatccaggccttcgagcctaagctcgtcgagggtaaagct
atccagctgcacccgcttgcctgtgaagccttcaacgccgacttcgatggtgaccagatg
gctgtgcacttgccactgtctgctgaggcgcaggctgaggctcgtatcctcatgcttgct
tctaacaacatcctctccccggcatccggtaagccacttgccatgccacgtctggacatg
gtgaccggtctttattacctcaccatggacaagactgaggatgagatcggcggacagggt
gcataccagcctgctaccgaaaccggaccagcaaccggtgtgtactcctcctacgctgag
gctcttatggctcgggaccgtggcgttcttggcctgcaggctaagattcaggtgcgtatt
agccacctgcgtcccccgactgatgtcgaggcagaacagttcccagagggttgggagcag
ggacagacctggttggctgataccacccttggtcgcatcatgttcaacgagctcttgccg
tggaactacccataccttgagggcgttatggtccgtaagggtggtggctccaacaagatt
ctcttgggcgacgtgattaatgacctcgctgcgacctacccgatgattactgtcgcgcag
acgatggacaagatgaaggatgccggtttctactgggcaacccgaagcggcgtgaccatc
accatgtctgacgtgctcgttcttcctaacaaggaagagatccttgaccgctatgaggcc
gaggctgcaaagatcgagcgcaagtactgggagcagggtgctctgaccgagcgcgagcgc
tacgaccgtctggttgagctctggaaggaggctaccgacgaggttggtaacgccgtcgag
aagctctatccggacgacaacccgattcctatgatcgtgaagtccggtgctgccggtaat
atgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactcaaagggtgac
tacatcacccgaccgattaagacttccttccgtgaaggcctgtcggttcttgagtacttc
aacaactctcacggttcgcgtaagggccttgccgataccgctctgcgtaccgctgactcg
ggttacctcacccgtcgtctggtggacgtcgcgcaggacgttatcgtccgcgaggacgac
tgtggcaccaagcagggcattcgtgtcccattggctgtcgaggttaaggatgctcagggc
aacgtcaccggttacaccggacacagcctcatcgagacctctgtcgctggccgtgtggct
tccgtcgacgtcaaggattctgaaggcaacgtcttggtgccggctggtgacaacctcacc
gaccagctcatcgagaagctcatcgctgcgggtatcgcagaggtcaaggttcgctccgtg
cttacctgccagactccgaccggcgtgtgcgctaagtgctatggcaagtccatggctacc
ggcaagctcgttgatatcggagaagcagtgggtattgtcgctgctcagtccattggtgag
cctggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggcgacattacc
ggtggtctgcctcgtgttcaggagctcttcgaggctcgtgttcctaagaaccgtgctccg
attgcttctgttgcaggtaccgtccaccttgaggatgaaggcaacttctacaccctcacc
atcaacccagatgatgggtctgatgttgtggtctacgagaagctttctaagcgtcaaggt
ctggctaccgttcgggttcctatggagtccaaccccggtgccatgatcgagcgcaccttg
tcagagggcgaccacgtgaatgtgggcgatcgtctgctgcgtggtcctgctgatccgcat
gacgtacttgaggttcttggccgccgtggtgttgagcagcacctcgtcgacgaggttcag
gacgtttaccgtgcacagggtgtggctatccacgataagcacatcgagatcatcatccga
cagatgctgcgtcgcggaactgttatcgagtccggatcgactgagttcctcccaggtact
ctcgttgatctttcggaggctaaggccgctaacgccgaggctattgccgctggtggtcag
cctgctgagctccgttcggagatcatgggtatcaccaaggcatcgctggctaccgagtcg
tggctgtccgccgcgtccttccaggagaccacacgcgtgcttaccgacgccgccatcaac
aagcggtccgataagctgattggcctcaaggagaacgtgatcatcggtaagctgatcccg
gccggtaccggtatttcccgttaccgcaacatctctgttaagccgactgaggcagcccgc
aatgcggcttactcaatcccgacttatggagactccatctatggcgatgatggctacggt
gagttcaccggtgcctccgtgccactggatgaggcctacgacctctaa
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