Cuculus canorus (common cuckoo): 104055280
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Entry
104055280 CDS
T08597
Symbol
TUBGCP6
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cuca03036
]
104055280 (TUBGCP6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
104055280 (TUBGCP6)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
104055280 (TUBGCP6)
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
104055280 (TUBGCP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
104055280
NCBI-ProteinID:
XP_009554684
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MESITQLFGDLCEAHLAGLPWKVHLGRRKISKRRAKQNLKKVAYNALFINLFQDEARQLR
SNVSRLPVKNKILMLSFDLRVGGLGAQADRLENLVEELETSECLPFTEVDSVLDLLVHLA
GTGPPQLVPQKKDYFENNKYVGRNVKYQGYDYYDVSVFEADIQSLITNEECQFNDTIQKT
LQIMEAAPGTGLPAIGLFSQNYPAGDKFEKETRVSLFGALVRSRTYDMDIKLDLPPVPDN
ADLSGLAIKVPQSIDQSEDEGFQSASNLTPDSQSEPSMTPDIDLWDAVLTYEPSKRRCWE
RIGYPPGKKDEPYLTEAGREAFDRFYQLREGELQRFSNTVLELPQLVLLKEPELVKDVLN
VLIGVVSATFSLNQAAQAFVIKEGVYVSGTSPETMHSLLSEVAEYGTYYTRLSRFSLQPV
LDSSYSKGLVFQAFTSGLRKYLQYYRACVLSTPPTLSLLTISFLFRKLGRQLRYLAELCG
IGTAVLGISGGAGASFPTGVKLLSYLYKEALNNCSNEHYPVLLSLLKTSCEPYTRFIYDW
VYSGVFRDVYGEFMIQVNEDYLCFRDKHYWTHGYVLISKEVEDCVPVFLKHIANDVYICG
KTINLLKLCCPRHYICWSDIPVPRISVSFSLEELKEIERDCAVYVGRMERIARYSSVSKE
EKDLRMEIAKQELIVHARETASKVLKAITDQQISERMALDAKKREQFQRLKEQFAKDQER
RLAIKQEEIDDDFSYARELREREKRLKALEEELGKKARQELIDHYSKLSDDAARREQRAL
WKIQRHKLETARLKFLLEDQKRIEEMLEKLPDGNYRQKLDIIPYKLCQSASDKNPGVKDP
HSQVSSVKPLCSSETVGRKESEPGLEYATSADKALPVPELTNNDADQLFQPKAAGSESSL
QTSEKAHSLLYSADSSPESDVNMEDFSSKPQEEQPVSISIQGSLLDEAFQNINSDLSENS
QVSENQPVLRGALVGEDNAPLHQQSEYDFETVLRPSAAWQGHVRVGENVFDVEYRRPRWN
IHGHASDASIRVGEYVPHVGIYPPRSSPYGHSSDSHIKISYTSEGVSSRPRWNVHGHVSD
AHIKIGEYASEVEPSRPRWNIHGHASEANIKIGEYVSDVAPTRPRWNIHGHASDTSIKIG
ENVSEVVSARPRWNIHGHASQSHIKIGELVSDTEPLKSRWSPFGHTSQSSIEIGKWAPST
EDDPVPHRKTISGPSSDSTXXXXXXXXXXXPAEGSRKETKVSXVKEKTLPHSQASDSVTV
FPDANIKDDKKESTMEEKQEVTADVVNKDISPDSSQSLEAEEPEKAIPQDTVPQETLFSE
ASVPKTNAEEAGGEGPQKKEQSYLKALSDQYCIEKYQDSYDLMSELPVSHLLHHVIPRSY
TFPVDPMVQSATDETAVQLSELLSLPVLMKRSVTAPLVSHVSLVNKAIVDYYFVELNVEK
HFEALRHFLLMEDGEFAQSLSDLLFEKLGSGQTPGELLNPLVLNSILNKALQYSLHGDTQ
LASNLSFALKYLPEVFKPNAPDALSCLELRYKVDWPLNIVITECCMNKYNKIFSFLLQLK
HMVWTLKDVWFHLKRTALVSRASNSVQFRQLQLYKHEMQHFVKVIQGYVANQILHVTWCE
FGNKLSSVGNLEEIHRTHAEYLNKAIFRGLLTEKAAPVMNIIHSIFSLILKFRSQLISQS
WSFDAGKQMAVHPNFGLMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNY
YKDN
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggagagcattacgcagttgtttggtgatttgtgtgaagcacatttggctggtttgcca
tggaaggtccacctgggcagacggaagatcagcaagagaagggctaagcagaatctgaag
aaggttgcttataatgcattgttcataaacctatttcaagatgaggctcgtcagctgcga
tcaaatgtttccaggcttccagtgaaaaacaaaattttgatgctgtctttcgacttgaga
gttggtggcctaggtgctcaagcggatagactggagaatcttgtggaggaactggaaaca
tctgaatgcttaccatttactgaagttgattctgtcttggatctcttagtacaccttgct
ggaacgggtcctccccagcttgtaccacaaaaaaaggactattttgagaacaacaaatat
gtggggagaaatgtcaaatatcaaggttatgattattatgatgtcagtgtatttgaagct
gatatacagtctctaataacaaatgaagaatgtcagttcaacgacaccattcaaaagaca
cttcagataatggaggctgcacctggcactggactccctgctataggcttattctcacag
aactatcctgctggtgacaagtttgagaaagaaacgcgtgtctcgctcttcggtgctctt
gtccgtagccgtacgtatgacatggacatcaagttggatttaccaccagtgcccgacaat
gcagatttgtctggacttgcaattaaagttccccaaagtatagaccaatcagaagatgag
ggattccagtcagcatccaatctgactcctgattctcagtcagagccaagcatgactcca
gacatagacttgtgggatgcagtgctaacgtatgaacccagcaaacgaagatgctgggaa
agaattggatacccacctggtaaaaaagacgaaccgtaccttactgaagctgggagagaa
gcttttgacagattttaccaactgcgggaaggggaactgcagcgattcagtaatactgta
cttgagcttccacagcttgtgctactgaaagaacctgaactggttaaggatgtcctgaat
gtcctcattggtgtggtatccgctacattttcactcaatcaagctgctcaggcatttgtg
ataaaggagggggtctatgtatctggaacttcaccagagacaatgcacagcctgctctca
gaagttgcagagtatggaacctattacacacgactaagtcgcttttctcttcagccggtt
ttagattcttcttatagcaaaggactcgtgtttcaggcattcacgagtgggctgagaaag
tatcttcaatattaccgagcctgtgttttgtcaacacctcctactttaagtcttctgacg
atcagctttctcttcagaaaattaggtcgtcagttgaggtatttagctgaactttgtggc
ataggaacagcagtgctggggatcagcggtggagctggtgcttcatttcctacgggtgtt
aaattgctttcctatctgtacaaagaggctctcaacaactgtagtaacgagcattatcca
gttcttctgtctttgttgaagacgagctgtgaaccatacacaaggtttatttatgattgg
gtctacagcggtgtattcagagatgtttatggagaatttatgatccaggtgaacgaggat
tatctttgtttcagagataagcattactggactcatggctatgttttgatttcaaaagaa
gtagaagattgcgtccctgtgttccttaaacatatcgctaatgatgtatacatatgcggg
aagaccataaacttattgaaattgtgctgtcctaggcattatatatgttggtcggatata
cctgttccccggatttcagttagtttttcacttgaggagctgaaagaaatagagagagat
tgtgcagtatacgtaggtcgaatggagagaattgcccgatacagttctgtaagcaaggag
gaaaaggatttgcgtatggagatagccaaacaagaattaattgttcatgctcgagaaact
gctagcaaagtactaaaagccattactgatcaacaaatatcagaacgaatggctttggat
gcaaagaaacgggagcagttccagagactgaaagagcaatttgctaaagaccaagagcgt
cgccttgcaataaagcaagaggagattgatgatgatttcagctatgcccgagaactgaga
gagagagaaaaaagactgaaagctttagaagaagaactgggaaaaaaggcaaggcaggaa
ttaattgaccattatagcaagctttctgatgatgcagcccgcagagaacaaagagcatta
tggaaaatccagcgacacaagttggaaacagcccgtcttaagtttctattagaagatcaa
aaacgcatcgaggaaatgcttgaaaaacttccagatggaaactacaggcaaaagttagat
attattccttataaactgtgccagtctgcttcggacaaaaaccctggtgtgaaggatcca
cattcacaagtgtcttctgtgaaacctctgtgttctagtgagacagttggcagaaaagaa
tctgagcctggactggaatatgctacttctgctgacaaagcactgcccgtgccagagctg
acaaataatgatgctgatcagctttttcagcctaaagcagcaggatctgaaagcagtctc
caaacttcagagaaagcacacagtcttctgtacagtgctgattcctcacctgaatctgat
gtgaatatggaagatttctcatcaaagccacaagaggaacaacctgtttccattagcata
cagggatctttgctagatgaagcattccaaaatattaactctgatctctctgagaattct
caagtaagtgaaaatcagcctgtcttgagaggagcactggtaggagaagacaatgcacca
ttgcatcagcaaagcgagtatgattttgaaacagttctcagaccatctgcagcttggcag
ggacatgttagagttggggaaaatgtatttgatgtggagtatagaaggcctcggtggaat
attcatggacatgcatcagatgccagcattagagtgggagaatacgtacctcatgtaggc
atttacccgccacgttcaagtccttacggacattcttcagactctcatataaaaatcagc
tatacttctgaaggtgtatctagccgaccccgatggaatgttcatgggcatgtttctgat
gctcatattaaaataggggaatatgcttcagaggtagagccctcgaggcctagatggaac
attcatggccatgcttcagaagccaatattaagattggagaatacgtgtcagatgtagct
cctacaaggccccgatggaacatccatggtcatgcttctgacaccagtatcaaaattggt
gaaaatgtgtcagaggtggtctcagctagacctcgttggaacatccatgggcatgcttca
cagtcgcacattaaaattggagaactggtttcagatacagagcctttgaaatctcgttgg
agcccgtttggtcacacgtcccagtcgagcatcgaaatagggaagtgggccccgtctaca
gaagacgatccagtacctcatcgtaaaaccatttcaggtccttcgtctgactccacnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctgctgaagggagcagaaaggaaacaaaa
gtgtcatgagttaaggaaaagactttaccacattcacaggcatctgacagtgttacagtc
tttcctgatgctaatattaaagatgacaaaaaagaaagtacaatggaagagaaacaagaa
gtaactgcagatgtggtcaacaaggacatttctccagattcctcacagagcttagaggca
gaagaacctgaaaaagcaattccacaagatactgtgcctcaagaaactctgttttctgaa
gctagtgtacccaagactaatgcggaggaagcgggaggggaaggtccacagaagaaagaa
caatcttatttgaaagccttatcggatcagtattgcattgaaaaatatcaagatagttat
gatctgatgtcagaactaccagtttctcatctcttgcatcatgtgataccaagatcatac
acttttcctgtggatcctatggtacagtcagcaacagatgaaacggctgtacagctgagt
gagctcttatctctgccggtgctgatgaaacgttctgttactgctccgcttgtatctcat
gtttctcttgtgaacaaagcaatagttgattactactttgtggaactgaatgtagagaag
cattttgaagcactgagacactttttgttaatggaagatggggagtttgctcagtcgctc
agtgacctgttatttgaaaagcttggatcaggacaaacacctggggaactgttgaatcca
ctggttcttaattctatcctaaataaagccttacagtacagtcttcatggtgacacccag
cttgcttccaatctttcttttgccctcaagtaccttccggaagtgttcaaacccaacgcg
cctgatgctctgagttgcttagagctaaggtacaaggttgactggcctctgaacattgtc
attactgaatgctgcatgaataagtacaacaagatcttctcctttttgcttcagctgaag
cacatggtgtggactctcaaggatgtttggtttcacttaaaacgcactgctttagtgagt
cgtgcatcaaattctgttcagtttcgacagctccagctgtataaacatgaaatgcagcat
tttgtgaaagttattcaaggttatgttgctaatcagattcttcatgttacatggtgtgaa
tttggaaacaaactgtcttctgtaggcaacctggaagaaattcacagaacacacgctgaa
tacctcaacaaagcaatcttcaggggtctgttgacagagaaggcagcccctgtgatgaac
atcatacatagcatcttcagcctcattttgaagttccgcagccagctgatctctcagtcg
tggagcttcgatgcaggaaagcaaatggctgttcatcccaactttggtctgatgcagcag
tcatacaataccttcaagtattactcccactttttattcaaagtggtaacaaagcttgta
aatcgaggataccagccccatttggaggacttcctactgcgtatcaactttaataactac
tacaaggataactga
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integrated database retrieval system
