Cuculus canorus (common cuckoo): 104055417
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Entry
104055417 CDS
T08597
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104055417 (DHX57)
Enzymes [BR:
cuca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104055417 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
zf-CCCH_4
HA2_N
Torus
zf_CCCH_4
zf-CCCH
AAA_22
zf-CCCH_2
nSTAND3
UBA
AAA_19
AAA_14
T2SSE
NB-ARC
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
104055417
NCBI-ProteinID:
XP_009554833
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MSSARKRGKPNKGGGRGRGGGGRGGSGGGGSGRGGRSSGHSNKSQLGGNRKCSTKIWDDG
DDFCLFEEPRLESRSNASARRGGQTKQKAEARMPLQTIHMTSENQRRVKELLQELQGQEL
APESEVAGSGEDNDETDYLDDEQCWSTDQEVSDIIPKLPADLPVHRIVESEVSSFAVHKL
SRYGFDSELCRTVLRSCNGNIGASLEYLLLKCFTERYGEKIQISTTAVEASQKECLEQRQ
EEAFALQSIYGEKFVERIQNRVWTFTLEMEYLANRLSKSKQKGDCTTNTAKQTSKEICKF
YLQGGCRFGSKCRFRHELPPSHPLKPAKNSVDDAHLRLDNDGPVYELEVRFPEENKYPLQ
APLVAFYSTNENLPLACRLHIAEFLFGKALIAAESNEPVVYTLVTSLEDESEISELLKNT
HHKYSVPPVSLLATPSVKLQTESAFGSDQVSKAPIVSRPQEEEEVAEEEEDEPEEAVAEN
ESYVKLKKKLSEKYDVPAKSLYNENVKICMQFRLKKSSRHFRSMLYERQKLPAWQERETI
LDLLKSHQVLVVSGMTGCGKTTQIPQFILDESLQGSPSRVANIICTQPRRISAISVAERV
AKERTERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGVTHVIVDEVHER
TEESDFLLLVLKDIMVQRPDLRIILMSATLNADLFSQYFHSCPIINIPGRTFPVDQFFLE
DVLAMTRYVLEDSSPYRRKTKQENKQNGRQKRTAFEEVEEDLRRAGVLEGTDTVVRDSDP
DQKLSLKQLLSRYKGVNKTVLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFL
PGLAEIKMLYEQLQSNALFNNRHSERCVVYPLHSSLSSEEQQSVFLRPPTGVIKIIISTN
IAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCF
HLFSSHHYNHLLIRQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSQLIEPPRTESLR
ASKVRLQDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFK
SPFVSPWDKREEANKKKLEFAVGNSDYLALLQAYKGWCLSIKEGSQASYNYCRENFLSGR
VLQEIASLKRQFTELLSDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLI
SAMLCAALYPNVVQVKKPEGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQT
KHFESPYLVYHEKIKTSRVFIRDCSMVSVYPLVLLGGGQVHMHLQKGEFVISLDDGWIRF
VAASHQVAELVKNLRCELDQLLQDKIKNPGMDLCVCPRGSQIISMIVKLVTTQ
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcaaggaagagagggaagcccaacaaaggaggaggaagagggagaggaggt
ggtggaagaggaggcagcggaggaggaggaagtggaagaggaggacgcagcagtggccat
tcaaacaagtcacaacttggtggaaatcggaaatgttcaactaaaatttgggatgatgga
gatgacttttgtctcttcgaggaaccaaggctggaatctagatcgaatgcgtctgccaga
agaggagggcaaacaaaacagaaagctgaagcaagaatgcctttgcagaccatacacatg
acttcggaaaatcagagaagagtgaaagaacttcttcaagagcttcaagggcaggagctg
gctccagaatcagaagtagctggttctggtgaagacaatgatgaaaccgattaccttgat
gatgaacagtgctggtcaacagatcaggaagtttctgacataataccaaagttgcctgct
gatctaccagtgcacaggattgtggaaagcgaagtgtcttcatttgccgtgcacaaactc
tccaggtatggttttgacagtgagctttgtaggacagtactgagatcctgcaatggtaat
attggagcatcattggaatatttgctattgaagtgctttactgaaagatatggagagaag
atacagatttctacaacagctgttgaagccagtcaaaaagaatgtttagaacagagacaa
gaagaggcttttgccctccagtcaatctatggagaaaaatttgttgaaagaattcaaaac
agagtttggactttcactttggaaatggagtacctagcaaacaggctcagcaaatccaaa
cagaagggtgattgtactacaaacacagcaaagcagacttcaaaggaaatatgtaaattt
tatctccaaggaggctgcaggtttggttcaaaatgcagattcagacatgaattacctcca
agccacccactaaaaccagccaagaactctgtagatgatgctcatctcagacttgacaat
gatggtcccgtatatgaacttgaagtaagatttcctgaagaaaacaagtatccactccag
gcacctcttgtggcattttattccactaatgagaatctacctcttgcctgtcgtttacac
attgctgaattcctctttggaaaggccttgatagctgcagagtctaatgaaccagtggtg
tacaccttagtgacttccttagaagatgaatctgaaataagcgaattacttaaaaatact
catcacaagtacagtgttcctcctgtgtccctgctggcaactccttcagtaaagctacag
acagagagtgcatttggttcagatcaagtgtccaaagcaccaatagtgtcacggcctcag
gaagaagaggaagtggcagaggaagaggaagatgagcctgaagaagctgttgcggagaac
gaaagttatgtgaagctgaagaaaaagctttccgaaaagtacgatgtgcctgcaaagtct
ctgtataatgaaaatgttaaaatctgcatgcagtttcggctgaaaaagtcttctaggcac
ttccgatccatgttgtatgaaagacagaagctccctgcatggcaagagagagaaaccatt
cttgatttgcttaagagccaccaagttcttgttgtaagcgggatgacaggttgtggaaaa
accactcagattcctcagtttattttggatgaatcattgcaaggatctccaagcagagtg
gcaaacatcatctgcacacagcctcgcaggatctctgccatttctgtggctgaacgtgta
gccaaagaaagaacagaaaggattggactcactgttggatatcagatccgtctggaaagt
gtaaagtcctcagctaccagactgttgtactgcactactggtgtgctgttgagaaggctg
gaaggagacctgactttgcagggagtcacacatgttattgttgatgaagttcacgaaaga
acagaagaaagtgacttcttgctgctggttttgaaggatataatggttcagaggccagac
ctgcgaattatactaatgagtgccaccttgaatgcagaccttttttctcaatactttcac
tcctgtccaattattaacataccaggtcgaacatttcctgtggatcagttttttctggaa
gatgtgcttgcaatgacaaggtatgttttagaagatagtagtccctacaggcgcaagaca
aagcaagaaaacaagcagaatggaagacaaaaacgaacagcatttgaagaagtagaggag
gacctgagacgtgctggcgttctggaaggcactgacacagttgttagagattcagacccg
gaccaaaaattaagtctaaagcagctcctttcccgatataaaggagttaacaagactgtg
ttgaaaacaatgtctgtcatggacttggacaaagttaatctggaattaatcgaagccttg
ttggagtggatagttgccggcagacattcataccccccaggtgctgtgttgatattttta
cctggtctagcagaaatcaagatgctttatgagcagctccagtctaatgctctttttaat
aacaggcacagcgagaggtgtgttgtttatccacttcattcttcactgtctagcgaagaa
cagcagtctgtgttcctcaggcctcctacaggagttatcaaaatcatcatctctacaaac
attgcagaaacatctgtcactattgatgatgtggtctatgtgattgattctggaaaaatg
aaagagaagagatacgacccaagcaaaggaatggaaagtctagaagacacatttgtgtcc
aaggccaacgctctacaaaggaaagggcgagcaggccgtgtagcctcaggtgtctgcttt
catcttttcagtagccatcattataaccatttgcttataagacagcagttacctgaaata
caaagagtgcccttggagcagctttgtctgagaattaagattctggagatgttttctgca
caaagtcttcactctgtcttgtcacaactaattgagccccctagaactgaatctttgcgg
gcatcaaaggtgcgactccaagacttaggagcattgactccagatgaaaagctcactcct
ctgggatatcacttggcatctctgcctgttgatgtcaggattggaaagctaatgctgttt
ggtaccattttccgctgcctggatcctgcattaactatagcagctagtctggcctttaag
tcaccttttgtgtcaccatgggataaaagagaagaagcaaacaaaaagaagttggaattt
gcagtaggaaacagcgactacctggctcttctccaggcctataagggatggtgtttaagt
atcaaagagggctctcaggcaagctataactactgcagggagaactttttgtcaggaaga
gttcttcaggaaattgccagtctgaaacggcaattcacagaactgctttctgacattggg
tttgtgaaggagggattaagagccagggacattgagaagaagtggtcccaaggaggcgat
ggcgtgttggatgccacaggagaagaggcaaattcaaatgcagagaacatcaagctgatc
tcagctatgttgtgtgctgcactgtatcccaatgttgtccaggtgaaaaagccggagggc
aaataccagaagaccagtacaggagcagtcaaaatgcaaccaaaagcagaagagctgaag
tttgttaccaaaaatgatggttatgttcacattcacccttcatctgtgaattaccagaca
aagcactttgagagcccctacctggtgtatcacgagaagatcaagaccagccgcgtgttc
attcgggactgcagtatggtgtcagtgtacccgctggtcctccttggaggcgggcaggtt
cacatgcatctgcagaagggagaatttgtaatttctcttgatgatggatggatacggttt
gtggctgcctctcaccaggtggctgagctggtgaaaaatctgcgctgtgaactagaccag
ctgctgcaggataaaatcaagaatcctggcatggatttatgcgtatgcccccgtggatct
cagatcatcagtatgattgtaaagcttgtgaccacacagtaa
DBGET
integrated database retrieval system
