Cuculus canorus (common cuckoo): 104057046
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Entry
104057046 CDS
T08597
Symbol
LARP4B
Name
(RefSeq) la-related protein 4B
KO
K18763
la-related protein 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
104057046 (LARP4B)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104057046 (LARP4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
104057046
NCBI-ProteinID:
XP_009556663
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MGCCFSKELNNSTNEEKAGLLQKSSEEEAPESRISKTLSSILGTLESQDLHTVERSVDGA
AVIVGCECVCSNDCVASNSKSGFWDRKTKYLSYKSMESAYSESSKRTYHRPFSFFNSFSH
LLKVSGTYRNLQRSEDKNEIIKKRAPKKSDSDGQHMSDIENINTTNKNVAAEDHCMFDHI
STSDIPAILDKGLQCDISLNRSFVEDYAVTCHYSRQNEMTIDNEDSKSDNLQKNSSSYRG
ISPTFCYLDVDNRQITKDWEFYSICVVDTEDLKGDEEMPATVHGETVADIDNSAVTDEGM
YSMARPLDTREEFPMQQSEQVEAKFNSQEELIEYKKEDRSNMQKKETKERCSIDVQSSYG
DLLADQCQVHRLNIDNTVIDSLRVKVCDEVALENRLEEVNSIGNTVSWNESLHRACDALK
LTDAAELDQDSPKSESGKHSDFISSVLVNTGVCNSGRNEGSHNSEVGLSRHPSSVVREVN
AGQVAESTRNNFELSLELHEMDSDSFLVSQHAEKVEEGYLKLGSEVNSNLRERTPQRTPS
DSQTFAPDSSEHHSVLVEFLKNKEKCTGMVLHSCETLNGTEMHEDLEESSDFQTQIEGCT
ENKTSTEVSDHSGMEEDLCVSNVELKGNMLEEAGSLNRTQSSVSDCTLTPHELHKTSADE
MFLKENSLELQISQESPGNKVCKYSNSYNKTSVSYVSREHEGMNEMDMNCRQDKQQDICS
LHALEKQWDVGTDSARIAGDVVESVKQRKLKAYINETVDNEAEGMKQNLDANIVDHDKCI
LTCSEGLTHNQNTNSPVPVALDNRVYKSVKLIDDTKNMEDASNLLLKAHNCLPSFCQNSH
THMCDKRMEEPELCHCTNPEPEVEDTIVSVGPFIEVGSETQEESECDVNEPNVQDGEVKQ
CINIHSKEENLPGFTVSAGNLEAYSTGNLKPLETKTTELKNTSYVLNTQMNDLIASWEHI
QSEHKILSNKELEIFVDPKQVDKYAATPSYEIPSASPGAAGLQQGSEPCVSDMMEDISSD
QEHSYELDRQNPHIEIWSHFISLQTGNTDWTNQPFPDTLSAGNGEYLMGFLWNNTVSNNT
MKNDRLCIVSEDFQNGLEDLTGASYAVARYPYQLLAPENVGTWEWQDTDELESTKVSELN
PNAKVWGTHMLHLEASGATDGSVSKTWEEIPDQPPDSCKEGLDTNGDDDKKHQNAVLTEL
QEPSPAVSVSDQTDMNPLALEHSEYESMHETTQTGGNEQLQPEGQEDLRELLKKTLEFCL
SRENLASDMYLISQMDSDQYVPIMTVANLDHVKKLSTDMDLIVEVLRSLPLVQVDEKGEK
VRPNQNRCIVILREVPESTPIEEVEALFKGDHLPKFINCEFAYNDNWFITFESEADAQQA
YRYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGYRPLDMNLYTQQRYTTSFYLPPVYS
PHQQFPLYSLIGPQAWSATHSYLDPSLVTPFPNTGFINGFTSPTFKPAASPLTTLRQYPP
RNRNPSKSHIRHTIPSAERGPGLLDSPTIFNFSADRLINGVRSPQTRQPGQNRTRMQNAA
TSYTKREVGTGRMEQTSVDSSPGLGRGRKNSYGYRKKREDKFTRGQTQSPPPPKPPSPSF
ELGLSSFPPLPGAAGNLKTEDLFENRLSSIVIGTPKERNINVDASTNTIPSGIPREPLLP
VSSTLPRTFERSPSPSQSSEDSKVVEKQQRETQSTEKLSSSTLSTACKSVQVNGAAIELR
KPSYAEICQRTTKDPPTLQPQKEQKPNTVACGKEERKPTETIEKNREPPPPKSHPGQPKD
QRRQSGRRSSPPAVGKRLNKEQNTPPKSPQ
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctgcttcagtaaagaattgaataacagcacaaatgaggagaaagctggcttg
ttacaaaaatcttcagaggaggaagcaccagagtcaaggataagtaaaactttatcttca
attttaggaactttagaaagccaggatctgcatacagtggaaaggtcggttgatggggca
gctgtgatagtcggctgtgaatgtgtttgtagcaatgattgcgtggcgtcaaattctaaa
tctgggttctgggatagaaaaacaaaatatctgtcctacaaaagcatggagagtgcttac
tctgagagctctaagagaacgtatcacagaccttttagcttctttaattcctttagtcac
ctcctgaaggtctctggtacgtatagaaatctgcagagaagtgaagacaaaaatgagatt
attaaaaaaagagcacctaaaaaatctgatagtgatggtcagcacatgagcgatatagaa
aatattaatactactaataaaaatgtagctgcagaagaccattgcatgtttgatcatatt
tcaacttcagatataccagccatcctagacaaaggattgcaatgtgacatttccttaaat
agaagttttgtggaggattatgcagttacatgtcattattcaaggcagaatgaaatgacc
atagacaatgaagacagcaagagtgacaacctacaaaaaaattcaagttcatatagaggg
atatcgccaacattttgctatcttgatgtagacaacagacaaattacaaaagattgggag
ttttacagtatttgtgttgtagatactgaagatctgaaaggggatgaagagatgccagct
actgtgcatggagagactgtggcagacatagataactcagctgttactgatgaaggaatg
tacagcatggcacgacctctggacactagggaggaatttccaatgcagcaatcagaacaa
gtggaagctaagtttaattcacaggaagaactgatagagtataaaaaagaggacaggtca
aacatgcagaaaaaggaaacaaaggaacgttgtagcatagacgtgcagtcttcttatggt
gacttactggccgatcagtgtcaggtgcacaggttaaacattgacaatacagtaatagat
agcttaagagtgaaagtatgtgatgaagttgcgcttgagaatagactagaggaggtaaat
tccataggtaacactgtcagttggaatgaatcactccatagagcttgtgatgctttaaaa
cttacagatgctgctgaattggaccaagacagccctaaatcagaaagtgggaaacacagt
gatttcatttccagtgtattggtaaacactggagtgtgtaattcaggaagaaatgaggga
agtcacaattccgaggttggtttaagtaggcatccctcaagtgttgtaagagaagtgaat
gctggacaggtggcagagagcacgaggaataactttgaattgtcattagagttgcatgaa
atggatagtgattcttttttggtgagtcaacatgcagaaaaagttgaagaaggctactta
aagttaggaagtgaagtaaactcaaatctgcgagagagaacaccacaaagaacacctagt
gatagccaaacatttgctcctgactccagtgaacatcacagtgttttggtagaattcttg
aagaataaagagaaatgcacaggtatggttttacatagctgtgaaactttgaatgggact
gaaatgcatgaagacttggaagaaagttctgattttcaaacacaaattgagggttgcact
gaaaacaagacatcaacagaagtttcagaccatagtggcatggaggaagacctctgtgtg
agtaacgtggagctaaaaggcaatatgcttgaggaagctggtagcttgaacagaactcaa
tcttcggtaagtgattgcactttgacacctcatgagctacataaaacaagtgcagatgaa
atgttcctaaaagaaaacagcctagaacttcaaatttcacaggagtcaccagggaataaa
gtatgcaaatactccaattcttataacaaaaccagtgtctcttatgtgtctagggaacat
gagggtatgaatgaaatggacatgaactgtagacaagataagcaacaggatatatgttcc
ttacatgcattggaaaaacaatgggatgtgggaactgactcagccagaatagctggggat
gtagtagaatctgtaaaacagagaaaattgaaagcttacataaatgagacagttgataat
gaggcagaaggcatgaaacagaatttggatgctaacattgtggatcacgataaatgcatc
ttaacttgcagtgaaggcttgactcacaatcagaataccaactcccctgtgcctgtagcg
ttggacaatcgtgtctataagagtgtaaaattgatagatgacactaaaaatatggaagat
gccagtaatctcttgcttaaagcccataattgtttgccttcattttgtcaaaattcacat
actcatatgtgtgataaacgtatggaagagccagagttatgtcattgtaccaatccagag
ccagaggttgaggacaccatagtttctgtcgggccttttattgaagtaggatcagaaact
caggaagaaagtgagtgtgatgtaaatgaacctaatgttcaggatggtgaagtaaaacaa
tgtatcaacatccactcaaaggaggagaacctccctggctttaccgtgtcagctgggaat
ctagaagcttattccacggggaatttaaagccattagagacaaagactactgaactgaaa
aacaccagttatgtattaaatactcagatgaatgacttgatcgcaagttgggaacatata
cagtcagaacacaaaattctctcaaacaaagagcttgaaatttttgttgacccgaagcag
gtagataaatacgctgctactccttcctacgaaatacccagtgcttctcctggtgccgca
gggttgcagcaaggcagcgagccatgcgtgtcagatatgatggaagacatatcgagtgac
caggaacattcctatgaattggacagacaaaacccccacattgaaatatggtcacacttc
atcagtctgcaaactggcaataccgattggacaaatcagccgtttcctgacacccttagt
gctggcaatggtgaatatctgatgggcttcttatggaataatacagtttctaacaatacc
atgaagaatgacagactttgtatagttagtgaagatttccagaacggacttgaagactta
acgggtgcttcatacgcagttgcaagatacccgtatcagctgctggcaccggaaaatgtt
ggtacttgggaatggcaagatacagatgaacttgagtcaacaaaggtttcagagttaaat
cctaatgcaaaggtgtggggaactcatatgttacacttggaagcaagtggtgccactgat
ggtagcgtgagcaaaacgtgggaagaaatacctgaccaacccccagattcctgtaaagaa
ggactggacaccaatggtgatgatgacaaaaagcatcagaatgcagtgctgacagagctg
caggagccatcaccagctgtttctgtgtcagaccagacagatatgaaccctttggctctc
gagcattcagagtatgagtctatgcatgaaaccactcagacaggtggaaacgaacagttg
cagccagagggtcaggaagatttacgagaattactgaaaaaaacactggaattctgctta
tcaagagaaaatcttgccagtgacatgtaccttatatcacagatggacagtgatcagtat
gtgccaataatgacagtagcaaaccttgatcatgtcaagaaactcagtactgatatggat
ttgattgttgaagtgctgagatcattgcctttagtccaagtggatgagaagggagaaaaa
gttaggccaaatcagaatcgctgtattgtcattttacgtgaagtccctgaatccaccccc
attgaagaggttgaagcacttttcaaaggagatcatttgcctaagtttatcaactgtgag
tttgcctataatgacaattggtttatcacatttgaatcagaagccgatgcacagcaggct
tacagataccttagagaagaagtgaaaactttccaaggaaaaccgattaaggcaaggata
aaagcaaaggcaatagctataaatacttttttgccaaagaatggatatagacctctggac
atgaacctctacacacagcagcgttacacaacgtcattttacttacctcctgtatacagt
ccccatcagcagtttccgttgtatagcttgattggcccgcaggcctggtcggccacccac
agctaccttgacccttcattggtaacaccatttcctaatactggatttatcaatgggttc
acatctccaaccttcaagcctgctgcttctccattgactacgctcagacaatatcctccc
aggaacaggaatcctagcaagtctcatatacgacatacaatacccagtgcagagagggga
cctgggcttctagacagtcctacaatattcaacttttctgctgatcgtttaatcaatggc
gtcaggagtccacagacgcggcagccaggacaaaacaggacacggatgcagaatgctgct
acgagttataccaagagggaagttggaactggacggatggaacagaccagcgttgactcg
tctcccggtttaggtagaggaaggaaaaactcatatggctaccgaaagaaaagggaggac
aagtttacaagaggtcagacacagtctccaccacccccaaaacctccatctcctagcttt
gaattgggtttatctagctttcctccattacctggagctgctggcaatctaaagactgaa
gacctttttgaaaacagactgtctagcattgtaataggaacgccaaaagaaagaaacatt
aatgtggatgcaagtacaaacactattccatcgggaattcctcgagagccgttgttgcca
gtttcttctacgttgcccaggacgtttgaaagatctccttcgccatcccagtcttctgag
gactccaaggttgtggagaaacagcagagagagacacaaagtacagaaaagctttcttct
tccacgctcagtactgcatgtaaatcggtacaagtcaatggggctgccatagaactgcga
aaacccagttatgcagaaatttgccagagaacaactaaggatccacctacattacaaccc
cagaaagaacagaagccaaacactgtagcatgtgggaaagaagaaaggaagcccacagaa
acaatagagaaaaacagagaacctcctcctccaaagtcacatcctggacaacccaaagac
cagaggagacagtcaggacgcagatcgtcccctccagctgttggcaaacgcttaaataaa
gaacagaatacacctccaaagtctcctcagtga
DBGET
integrated database retrieval system
