Cheilinus undulatus (humphead wrasse): 121504912
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Entry
121504912 CDS
T07473
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121504912
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121504912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Amastin
Motif
Other DBs
NCBI-GeneID:
121504912
NCBI-ProteinID:
XP_041635948
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Position
22:complement(21214248..21459285)
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AA seq
672 aa
AA seq
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METAEARGASTCVEKMEKEVAPQKRQFHRATVLNIISCLCSVASIAFCILLSFNAADIKK
RVVDLEGENGEHTFVRAPGYSMDDFNSLIEQRVDELLSQRSYENFVKIRTARQAAPECNC
PPGPPGKRGRRGRDGEPGPPGPPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLPGDPGQPGETGPMGPEGPEG
QKGLIGPPGIPGVDGQKGDVGIPGLDGVPGAKGEMGERGEKGDMGEDGPKGEMGEKGDAG
SSAAGIKGEPGEPGRSGHKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGERGE
HGPPGKGERGDIGPAGAKGSQGESGTPGPKGSKGETGDKGDLGSIGPRGPPGQKGDQGAT
EIIDYNGNIQEALQKITTITVTGPPGPPGPMGPMGLKGDRGMPGLPGLDGERGYKGSKGD
MGMPGASGDKGATGLPGLPGVNGMKGDKGDSGLPGPQGASISGPPGPPGPHGPPGPMGPH
GFPGPKGEPGLHGMKGIRGEPGHKGDRGPLGLPGASGLDGKPGIRGMDGPPGPAGPAGPK
GDIGEKGAQGEPGPRGPYGLPGAPGTPGLDGEKGKKGKKGPKGEKGEQGAPGLDAPCPLG
PDGLPMPGCWQK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcggaggcaagaggtgcatctacgtgcgtggaaaaaatggagaaagaagtg
gcgcctcagaagcgacaatttcaccgcgcaacagtgctgaacataatctcgtgtttatgc
tcggtggcgtccatcgccttctgcattctcctgagctttaacgcagctgatatcaagaag
agggttgtggatctggagggtgagaatggcgagcacacctttgtccgtgcccccggctac
tccatggatgattttaattcacttattgaacaaagagtggacgagctgctctcccagcgc
tcctatgaaaattttgtcaagattaggacagccagacaagcagcacctgaatgcaactgc
cctccaggacctccaggaaagcgaggaagaagaggccgcgatggagaacctggacctcct
ggccccccaggtccaaagggtgaaaagggggatcaaggcgaccagggaccacggatggtc
ttccctaagatcaatcatggctttctttccgctgaccagcagctcataaagcggcggctc
attaagggagatcaagggcaagcaggaccacctgggcctccggggcctccaggccctcct
gggccaagggggcctccaggggatacagggaaagatggacccagaggtgtacccggtctg
ccaggggatccaggacagcccggagaaacaggacccatgggacctgaggggccagaaggg
caaaagggtttaattgggcctcctggcatcccaggtgtcgatggacaaaagggggatgtt
ggcatcccaggattggacggcgtccctggagctaagggtgaaatgggcgagcgaggtgaa
aagggcgatatgggtgaagatgggcctaaaggtgaaatgggagagaagggagacgctggc
tcatctgctgcaggcatcaagggtgaaccaggagagcctggacgaagtggacataaggga
gagccaggacttccagggctgcctggactcccagggataaagggtgagcctggattcctt
ggacctcaaggagagccagggcttccaggactcccaggaacaaagggtgagagaggagag
cacgggccgccaggaaagggtgaaagaggagacattggacctgccggagcaaagggttca
cagggagaatccggcactccgggtcctaaaggatcaaagggtgagactggagataaggga
gacttaggatcaatcggcccgaggggtccccctggacagaaaggagaccagggagccaca
gaaatcatcgactacaatggaaacattcaggaggctctacagaagattaccactattaca
gtaacgggccctccaggacctcctggaccgatggggccgatgggtttgaagggggatcgt
ggcatgcctggtcttcctgggctggatggtgaaagaggctacaaaggttccaaaggagac
atgggaatgccgggagcttcaggggataaaggagcgactggtttacccggcctacctggt
gtcaatgggatgaaaggtgacaaaggagactcaggtttgcctggtcctcagggtgcttca
atcagtgggcctccagggccgcccgggccccatggacccccaggaccaatgggcccccat
ggtttccctggaccaaagggggagcctggtttgcacggcatgaagggtattcgaggggaa
ccaggccacaaaggcgaccgcggacccctgggcctccccggagcctccggcttggacggc
aagcccggaattaggggcatggacgggcctccgggtccagctggtccggctggaccgaag
ggcgatatcggtgagaaaggagcacaaggcgagccaggacctcggggaccttatggactc
cctggagccccaggaacaccaggcttggatggggagaagggaaagaagggcaaaaaaggg
cctaagggcgagaaaggcgaacagggtgcccctggattagatgcaccctgcccattgggg
ccggatggattaccgatgcctgggtgctggcagaagtga
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