Cheilinus undulatus (humphead wrasse): 121517368
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Entry
121517368 CDS
T07473
Symbol
cacna1fb
Name
(RefSeq) LOW QUALITY PROTEIN: calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04010
MAPK signaling pathway
cud04020
Calcium signaling pathway
cud04260
Cardiac muscle contraction
cud04261
Adrenergic signaling in cardiomyocytes
cud04270
Vascular smooth muscle contraction
cud04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121517368 (cacna1fb)
04020 Calcium signaling pathway
121517368 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121517368 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
121517368 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
121517368 (cacna1fb)
04270 Vascular smooth muscle contraction
121517368 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cud04040
]
121517368 (cacna1fb)
Ion channels [BR:
cud04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121517368 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121517368
NCBI-ProteinID:
XP_041655002
LinkDB
All DBs
Position
11:49483479..49591969
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AA seq
2070 aa
AA seq
DB search
MNVPGSIRDQWAGLMSEDTWWTGAGRNGYTNAVDGEEGGGEGEEEEEGGEGDGGGGDVGV
EGGRGQEQDGEWDNELDGEEEGGVKMTRTDTLHSTTSSTGTQRKKGQHAKKQVQGSNQVQ
RAPRALYCLKLNNPIRRAALSIVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHD
LEQVEYVFLIIFTIETFLKILAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHK
SGEQATTHHVPGKPGGLDVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALL
VLFVIIIYAIIGLELFIGRMHRTCYYSGTDNYVEDDPVPCAFAGHGRQCVINGSECRGRW
DGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFV
LNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNP
RPSLGDLSDKKRGKFGWFSHSNETHASLPASETGSENTVNIDEEHTNCCQACCGRMMKIG
CCRTLRRWNRVCRRNCRTAVKSVTFYWLVLLLVFLNTSLSASEHYNQPDWLTQVQDIANK
VLLSLFTVEMLLKMYSLGLAHYFVAFFNRFDCFVVCGGIMETILVEMEIMPPLGISVLRC
VRLLRIFKVTRHWTALSNLVASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDE
TQTKRSTFDSFPQALLTCFQILTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGN
YILLNVFLAIAVDNLAGGDGDDKKKEXTEEGEEEEEGAEGEGEVKVDEDTEYEEEEEIPE
GEDGQIQLKMADLAPPKEKVLPIPEGSAFFCLSKTNPIRVFCHTLIHHHIFTNLILVFII
LSSCSLAAEDPIRAHSFRNNILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNL
LDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGN
IMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKHTPEQCKGTFVVYKDGDVNHPMVRERIW
HNSDFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYII
IIAFFMMNIFVGFVIITFREQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYK
FWSIINSTGFEYVMFVLILLNTVTLAIQHYEQSKTFSYVMDILNMVFTGLFTVEMLLKLL
ALRPRHYFIDAWNSFDALIVVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSK
GEGIRTLLWTFIKSLQALPYVALLIAMIFFIYAVIGMQTFGKVAMQDHTQINRNNNFQTF
PQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCA
FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRI
QPPLGFGKLCPHRVACKRLVAMNMPLNADGMVTFNATLFALVRTALKIKTEGNPEQENEE
LRGIIKKIWKRMKPKLLDEVIPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGGLPGED
DGTANPSALCKAGLKTLQDLGPEMRLALNEDLEEDEEDAMMEDDEMDDNAAYKGENGYGP
DKDRRGSLLTPTGPGGVISEGGVSNGGLIHRVGSLTKMPNGSEHDEHHRRGDNMRSSINH
HHHHRPSVKNGMVDHAHKRPPYYKHGRRDSRERYWRNGDMETYGEHGYYSREDDNDSITS
RDRHYYDEPPVYRDHYDGHAPYSNSNYGNGYNDSRRTTRRRLLPATPTGRKPSFNIQCLR
RQGSSDDLPIPGTYHPTSPPRRTRMQQTFSSYESRHSGHNPAASSASWANPCPRRGRLLY
APLILVEEEGSPPWGGGGGGGEMKKGAGRAPPPYRAYTTLRVPSQLGAQLTEKRGSADSL
VEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLSAGSHSFLNNASAD
PAALYSDEEPIRTGRDEEELADEMTCVTSF
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcccggttcaatcagagatcagtgggcagggctgatgagcgaggacacctgg
tggacaggtgctggtcgaaatggctacaccaatgctgtggatggggaggagggaggaggt
gagggtgaagaagaggaggagggaggagagggggatggaggaggcggagacgtgggagta
gaaggaggaagaggacaagagcaggatggagagtgggacaacgagctggacggagaagag
gaggggggagtaaagatgactaggaccgacacgcttcactcaaccaccagttcaacagga
acacagaggaagaaaggacaacacgccaagaaacaggttcagggcagtaatcaggtccag
agagctcccagagcgttatactgcctgaaactcaacaacccaatcagacgagccgctctg
tccatcgtggagtggaaaccctttgatatttttattctgttagccatctttgctaactgc
gtcgctctgggagtttctaaaccgtttcctgaggacgactccaactccaccaaccacgac
ctggaacaagtggagtacgtcttcctcatcatcttcaccatcgagaccttcctgaagatc
ctggcctacggtctggtgatgcacccgagctcctacatcaggaacggctggaatctgctt
gacttcgtcatcgtcatcgtcgggttgttcagtgtcgtcttggaaacgatgactcataaa
tctggcgagcaggcgaccactcatcacgtcccggggaaacctggaggtctggacgtcaaa
gctctgagagccttcagagtcctgaggcccctcagactggtctctggagtccctagttta
cagattgtgttgaactccatcatgaaggccatggttcctctgctccacatcgctctgctc
gtcctcttcgtcatcatcatctacgccatcattgggctggagctcttcatcggacgcatg
caccgcacctgctactactctggaacagataattacgtggaggacgaccccgtgccgtgt
gcgttcgccggccacggtcgtcagtgtgtcattaacggctcggagtgtcgggggaggtgg
gacggtccaaacggaggaatcacgaacttcgataacttcttcttcgccatgctgacggtg
tttcagtgcatcaccatggagggctggaccgacgtcctctactggatgaacgacgccatc
ggcttcgagctgccctgggtttacttcgtcagtttggtcatttttggatcgttctttgtt
ctcaacctggttttgggagtcctcagcggagagttcagcaaagagagagagaaggcgaag
gctcgcggagacttccagaagctgagggagaagcagcagatggaggaggacctgtgcggg
tacatggactggatcacacaggccgaggacatggacgagctggacgaggacggaaaccca
cgtccgtctctgggcgatttgtcggataagaagagagggaagttcggatggttcagtcac
tccaatgagacccacgcgagtcttcctgccagtgaaaccggttctgaaaacacggtgaac
atcgatgaggagcacaccaactgctgccaggcctgctgcggtcggatgatgaagatcggc
tgctgtcggaccttacgtcggtggaatcgagtctgtcgcagaaactgtcgcaccgccgtg
aaatcggtgacattctattggctggttctgctgctcgtcttcttgaacacctccctcagc
gcctcggagcactacaaccaaccggactggctcacacaagtccaagacatcgccaacaag
gtcctgctgtctctgttcacggtggagatgctgttgaagatgtacagtctggggctggcc
cactacttcgtggcgttcttcaaccgcttcgactgcttcgtggtgtgcggcggcatcatg
gagaccatcctggtggagatggagatcatgcctcctctggggatctcggtgctccgctgc
gtccgcctgctcaggatcttcaaggtgacacgccattggacggctctgtccaacctggtg
gcgtccctgctgaactccatgaagtccatcgcctccctgctgctgctgctcttcctcttc
ctcatcatcttcgctctgctcggcatgcagctgttcggagggaagttcaacttcgacgag
acgcagaccaaacggagcaccttcgacagcttccctcaggcgctgctcacctgcttccag
atcctgaccggcgaggactggaacgtggtgatgtacgacggcatcatggcgtacggaggc
cccgtgtttcctgggatgatcgtctgcgtttacttcgtcatcctcttcatctgtggtaac
tacatcctgctgaacgtcttcttggccatcgctgtggataacctggcgggaggagacgga
gacgacaagaagaaagagtgaacggaggaaggcgaggaggaggaggagggcgccgaagga
gaaggagaagtgaaggtggacgaagacaccgagtacgaggaggaagaggagatccctgaa
ggagaggacggtcagatccagttaaagatggccgacctggctcctcctaaagaaaaagtt
ctccccatcccagaaggcagcgcgttcttctgcctcagcaagaccaacccgatccgtgtg
ttctgtcacactctgatccaccaccacatcttcaccaacctcatcctcgtcttcatcatc
ctcagcagctgctcactggctgctgaagatccaatcagagcgcactccttcaggaacaac
attctgggttatgctgactacgccttcacttccatcttcactgtggagattctgttaaag
atgacggtccacggagcgttcctccatcagggctccttctgcaggaactggttcaatctg
ttggatctgttggtcgtcagcgtctctctggtctccttcttccttcactcaagtgcgatc
tctgtggtgaaaatccttcgagtccttcgagtgcttcgacctctgagggccatcaacaga
gccaagggactcaagcacgtggtccagtgtgtgtttgtggccatcaggacgatcgggaac
atcatgatcgtcaccactctgctgcagttcatgttcgcctgcatcggggtccagctcttc
aagggtaaattttaccgctgcaccgatgaagccaaacacactcctgaacagtgcaagggg
acgtttgtggtctacaaggacggtgacgtgaaccacccgatggtcagagagagaatctgg
cacaacagcgactttaacttcgataacgtgctgatggggatgatggcgctcttcaccgtc
tccaccttcgagggctggccggcgctgctgtataaagccatcgatgctaacggggagaac
tcgggccccatctacaactaccgtgtggagatctccatcttcttcatcgtctacatcatc
atcatcgccttcttcatgatgaacatcttcgtgggttttgtcatcatcaccttcagggag
cagggagagcaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggag
tacgccctgaaggctcagcccctcaaactctacatccccaagaacccggtccagtacaag
ttctggtccatcataaactcgacgggattcgagtacgtcatgttcgtcctgattctgctc
aacacggtcaccctggccatccagcactacgaacagtcaaagaccttcagctacgtcatg
gacatcctgaacatggtgttcaccggactcttcaccgtggagatgctgctcaagctgctc
gccctccgaccccggcattattttatcgatgcctggaactcgttcgacgctctgatcgtg
gtcggcagtgtcgtcgacatcgtcgtcacagagttcagcagcggcgaggacagctctcgc
gtgtccatcactttcttccgtctctttcgagtgatgcgattggtcaagctgctgagtaaa
ggggagggcatcaggacgctgctgtggactttcatcaagtcactgcaggctctgccgtac
gtcgctctgctcatcgccatgatcttcttcatctacgccgtcatcgggatgcagacgttt
gggaaggtggccatgcaggatcacactcagatcaacaggaacaacaacttccagactttt
ccccaggccgtcctcctcctcttcaggtgtgccacaggtgaggcgtggcaggagatcatg
ttggcgagcctccccggtaaacgctgcgaccccgagtcagactacgaaccgggagaggag
ttcagctgtgggagcaacttcgccatcgtttacttcatcagcttcttcatgctgtgtgct
ttcctgatcattaacctcttcgtcgccgtcatcatggacaactttgactatctgacgcgt
gattggtcgattctggggcctcatcatctggatgagtttaagaggatctggtcggaatac
gacccggaggccaagggtcgtattaaacacctggacgtggtggctctgctcaggaggatt
cagcctcctttagggtttgggaaactctgtcctcacagagtggcctgcaagcgcctggtg
gcaatgaacatgcctctgaacgctgatgggatggtgacctttaacgccacgctcttcgct
ctggtccgcaccgctctcaagatcaagactgaaggcaaccctgaacaggaaaacgaggag
ctgagggggatcattaagaagatctggaagaggatgaaaccaaaactactggatgaagtc
ataccgcctcatgaagaggaggaggtgactgttggaaagttttacgctacattcctgatc
caggattatttcaggaagttcaggaagaggaaagagaaaggaggcctccctggagaggat
gacggcaccgccaacccgtctgctctgtgtaaagccggtctgaagaccctgcaggatctg
ggtcctgagatgcgtctggctctgaacgaggacctggaggaggacgaggaggacgccatg
atggaggacgatgaaatggacgacaacgctgcatacaagggtgaaaatggttatggacct
gacaaagatcgccgtggctccttactgacacctacaggtcccggaggagtgatcagcgaa
gggggcgtgtctaacggcggcctcatccaccgtgtcggctcgctcactaagatgccgaat
ggcagcgaacacgacgagcatcatcgccgtggagacaacatgaggtcatccatcaatcat
caccatcatcaccgcccatcagtcaagaacggcatggtggaccacgcccacaagagacca
ccgtactacaaacatggaaggagggactccagggagagatactggaggaatggagacatg
gagacgtacggagagcatggatactacagccgagaggacgacaacgacagcatcacctcc
agagacagacactactacgatgaacctcctgtgtacagagatcattacgatggccacgcc
ccctacagcaacagtaactatggtaacggctacaacgacagcaggaggacgacccggaga
cgcctacttcctgctacgcctactggtcggaagccgtcctttaacatccagtgtctgagg
aggcagggcagcagcgatgacctaccgatccctggaacgtaccaccccacctctccgccg
cgccgcacacgcatgcagcaaacatttagcagttatgagtcccgtcactccggtcacaac
cctgcagcgtcctcggcatcctgggcgaacccgtgtcctcgccgtggtcgcctcctctat
gctcctctcattctggtggaggaggaaggcagcccaccctggggaggaggaggaggagga
ggagaaatgaagaaaggagcaggacgagctcctcccccctaccgagcgtacaccaccctc
agagtcccatcccagcttggcgctcagctcacggagaagcgaggatcagctgacagtctg
gtggaggcggttctcatctcagagggtcttggtctatacgcacgggatcccaagtttgta
gcattcgccaagcgggagatcgcagacgcttgtcatatgacggtggacgaaatggaatca
gccgccagcgacctcctcagcgccgggagccacagttttctcaacaacgcctctgcagac
ccagccgctctctacagcgacgaggagccaatcaggacgggccgtgacgaagaggaactg
gctgacgagatgacctgcgtgacatcattctga
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integrated database retrieval system
