Cronobacter universalis: AFK65_01355
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Entry
AFK65_01355 CDS
T04063
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cui
Cronobacter universalis
Pathway
cui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK65_01355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cui03019
]
AFK65_01355
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_01355
Enzymes [BR:
cui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFK65_01355
Messenger RNA biogenesis [BR:
cui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK65_01355
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK65_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALB53385
UniProt:
A0A376DY10
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All DBs
Position
294632..296461
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIP
ALVKTGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSRDEQQAVLAGCRTGEVRLLY
IAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFIAL
TATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKAPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPRRYDGLVDAQKAL
SAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEHWVSVIRQLIHLG
VVTQNIAQHSALQLTEAARPFLRGEAPLMLAVPRVAALKPRVAQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIR
EHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtttacagtcaggaaacgctggctaagcaggttttacaggaaacc
tttggctatcagcagttccgtccaggccaggccaccattatcgacgcggtgcttgaaggg
cgcgactgcctggtggtgatgcccaccggcggcggcaaatcgctgtgttatcaaattccg
gcgctggtgaaaaccggcctgaccatcgtggtttctccgctgatttctctgatgaaagac
caggtcgatcagcttctggcgaacggcgtggccgcggcgtgtctgaattcgacgcagagc
cgcgacgagcagcaggcggtgctggcgggctgtcgtaccggagaggtgcgcctgctctac
atcgcgccggaaagactgatgatggataacttcatcgacaccctgggctactgggatctg
gcgatggtggcggtagatgaagcgcactgtatctcccagtggggccacgatttccgcccg
gaatacgcggcgctcgggcagctgcgcgcgcgtttcccggcggtgccgtttatcgcgctc
accgctacggcggatgacaccacgcggcgcgatattgttcgcctgctgggccttgacgat
ccgctgattgaaatcagcagttttgaccgcccgaacatccgctacatgctgatggaaaaa
ttcaaaccgctcgatcagctcatgcgctatgtgcaggagcagcgcggtaaatccggcatc
atctactgcaacagccgcgcgaaagtggaagacaccgccgcgcgcctgcaaagccgcggc
atcagcgccgccgcctaccacgcgggtctcgagcatgaggtgcgcgcctcggtgcaggag
aaattccagcgcgatgatttacagattgtcgtggcgaccgtggccttcggcatgggtatc
aacaagcccaacgtgcgctttgtcgtgcacttcgatattccccgcaatattgaatcctac
taccaggagacgggccgcgccgggcgcgatggcctgcctgccgaggcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagaaaaagcgccaggcccgctc
caggatatcgagcgtcacaagctaaacgcgatgggcgcgttcgccgaggcgcaaacctgc
cgccgtctggtgctgctgaactatttcggcgaaggacgccaggcgccgtgcggcaactgc
gatatctgtctcgatccgccgcgccgttacgatggcctggtggacgcgcaaaaggcgctg
tcggctatcgcgcgcgtggagcagcgcttcgggatggggtatgtggtggaggtgctgcgc
ggcgcgaataaccagcgcatccgcgagctcggccatgacaagctcaaggtgtacggcatc
gggcgcgatcagagccaggagcactgggtcagcgttatccgccagcttatccatctgggc
gtggtgacgcagaacattgcgcagcactcggccttgcagctcaccgaagccgcgcgtccg
ttcctgcgtggcgaagcgccgctgatgctggcggtgccgcgcgtcgcggcgctcaaaccg
cgcgtggcgcagaaatcgtacggcggcaattatgaccgcaagctgttcgcgaaactgcgc
aaactacgcaaagccatcgccgatgaagaaaacattccgccgtatgtcgtctttaacgac
gcgacgctgattgaaatggccgagcagatgccgctcagccccggcgaaatgctcgggatt
aacggcgtcggcacccgcaaactggagcgcttcggcagaccgtttatgacgcttatccgc
gagcacgtcgacggcgacgacgaagagtag
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