Cronobacter universalis: AFK65_15660
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Entry
AFK65_15660 CDS
T04063
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cui
Cronobacter universalis
Pathway
cui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFK65_15660 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cui03400
]
AFK65_15660 (recD)
Enzymes [BR:
cui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AFK65_15660 (recD)
DNA repair and recombination proteins [BR:
cui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK65_15660 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Helicase_RecD
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
AAA_22
AAA_16
SLFN-g3_helicase
PhoH
nSTAND3
AAA_28
DEAD
T2SSE
CbiA
TrwB_AAD_bind
SRP54
Acetyltransf_6
UvrD_C
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
ALB56025
UniProt:
A0A376ESY4
LinkDB
All DBs
Position
complement(3389533..3391368)
Genome browser
AA seq
611 aa
AA seq
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MKMHQLIQQAVVQKLLRPLDAQFAMMVASDEEPAVMFAAALVSRDAGEGHVCLPLSRLCA
AHCFAGRHDEMAQRLFEAAGNPDDWRSLLLASPAVSEDDAPTPLKLIGERLYLNRMWRHE
MAVAAFFRERNHRIELEEARLSAVLEALFGPPGDETDWQKVAAAVALTRRIAVISGGPGT
GKTTTVAKLLAAMVQLAEEKPPRIRLAAPTGKAAARLTESLGAALRRLPLSDAQKNALPE
EASTLHRLLGAQPGSQRLRYHEGNPLHLDVLVVDEASMIDLPMMARLIAALPDHARVIFL
GDRDQLASVEAGAVLGDICHYVNHGFTAERAAELGRITGCHISGGEPHPAGALRDCLCLL
QKSYRFGSDSGIGQLAFAVNRSDHRAASATFSRGFDDIACKTLAGNDDYAQMIDETLAGY
ERFLTLVRERAEPEAILAAFSEFQMLCALREGPFGVAGLNERVEHALAQRRLIRRTPLSR
WYEGRPVMISRNDSALGLFNGDIGVALDRGNGLRVWFPMPGGKLKPVVPSRLPDNDTAWA
MTVHKSQGSEFDHAALLLPGQFAPVVTRELVYTAITRARRRLSLYANERVLEMAIATRTE
RRSGLMACFEQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatcaactcatccagcaggccgttgtgcaaaagctcctgcgcccgctggac
gcccagttcgccatgatggtggcaagcgatgaagaacccgcggtaatgttcgccgccgcg
ctggtcagccgcgacgccggagaagggcacgtttgtttgcccctttcacggctgtgtgcg
gcgcactgcttcgccgggcgtcacgatgaaatggcgcagaggctgtttgaggcggcgggc
aatccggacgactggcgctcgctgttattagcatcgcccgcggtgagcgaggacgatgcg
ccgacgccgctgaagcttatcggcgagcgcctgtatctgaaccgcatgtggcgtcatgag
atggcggtcgcggcgttttttcgcgagcgtaatcatcgtatcgagctggaggaagcgcgc
ctgagcgcagtgctggaggcgctttttgggccgccaggcgatgaaacagactggcagaaa
gtggcggcggcagtcgcgctcacccgacgcatcgcggtaatttccggcgggccgggaacc
gggaaaaccaccacggtggcgaaactgctggcggctatggttcagcttgcggaggaaaaa
ccgccgcgtatccgccttgccgcgcctaccggtaaagcggcggcgcgtctgacggaatcg
cttggcgccgcgctgcgccgtttaccgctgagcgacgcgcagaaaaacgcgctgccggaa
gaggccagtacgctgcaccgcctgctgggcgcgcagccaggcagccagcggctgcgctac
cacgaaggtaatccgctgcatctggatgttctggtggtggatgaggcttcgatgatagac
cttccgatgatggcgcggcttatcgcggcgctgccggaccacgcgcgggtgatcttttta
ggcgatcgcgatcagctcgcctccgtggaagcgggcgcggtgctcggcgatatctgccac
tacgtaaaccacggtttcaccgcagagcgcgccgccgagcttggccgcattacggggtgt
cacattagcggcggcgagccgcatcccgcgggggcgctgcgcgactgcctgtgcctgctg
cagaaaagctatcgttttggcagcgattccggcatcggccagctcgcgtttgccgtgaac
cgcagcgatcatcgcgccgccagcgcgacgtttagccggggatttgacgatatcgcctgc
aagacactagcgggtaacgacgattacgcgcagatgattgacgagacgctggcaggctac
gagcggttcttaacactggtccgcgagcgtgccgagccggaggccattcttgcggccttt
agcgaattccagatgctctgcgcgctgcgtgaagggccgttcggcgtcgccgggcttaac
gaacgtgtggaacatgcgctggcgcagcggcgtctgattcgtcgcacgccgctgtcgcgc
tggtatgaagggcggccggtgatgatttctcgcaacgacagcgcgctggggctgtttaat
ggcgatattggcgtggccctggatcgcggcaacggcctgcgcgtctggttcccgatgcct
ggcggtaagttaaaacccgtcgtgccaagccgtttgccggataatgacaccgcgtgggcg
atgacggtacataaatcacagggttctgagttcgatcatgcggcgctgctcttgccgggg
cagttcgcgccggtggtcacgcgggagctggtctatacggcgattacgcgcgcgcggcgg
cggttgtcgctgtatgcgaatgagcgggtgctggagatggctatcgcgaccagaacggaa
cggcgcagcggcctgatggcctgctttgaacagtaa
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