Corynebacterium ulcerans 210932: Cul210932_0791
Help
Entry
Cul210932_0791 CDS
T03406
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cun
Corynebacterium ulcerans 210932
Pathway
cun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cul210932_0791 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cun03400
]
Cul210932_0791 (mfd)
Enzymes [BR:
cun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cul210932_0791 (mfd)
DNA repair and recombination proteins [BR:
cun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Cul210932_0791 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
RecG_dom3_C
AAA_22
UB2H
DUF3638
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIT88748
LinkDB
All DBs
Position
811874..815668
Genome browser
AA seq
1264 aa
AA seq
DB search
MLSTDNAAANSHHPAMLAGLLKVAATDPKIKGLLEHVGDPALHITGIDQSRPWAIGALSH
RAPVLVITATGREAEDLTAELRAMLGDSVAWFPAWETLPHERLSPAADVAGQRARILSHL
NDLRVVVTAARGISQPILQDAEGRNALLLEAEKDYDLEELTRQLVFRAYQHVDLVAKRGE
FATRGGILDIFPTTMDRPVRLEFWGDEITEIREFSVADQRAIPDSSHGAVEIFPARELLV
TPAVAERAGDLALKYQGNPTLQELLSKLAEGTPADGMEALIPALVDTPLVTLPELMPQGT
HVIAVGPEKIRTRVADLQATDAEFLAAGWEAAAMGAAGPVAAQGLDLEASSYRSYESLEI
SARQAGCSWWTFAPSGMFEADDADTLPLDFEAGPTPRGDLSQIEEMMSLLLAHTTAGGRA
AFIAPAKGAIKRMVDRFKEKGIPTKVATPGWEPTPGEVTLYQALSHAGLVFPKVRKKAGT
EALPLVVVTETDLTGNRVGDIAGAKRRPAKRRNRVDPLALKTGDFVVHETHGIGRFLKMT
ERTITSGDETSRREYIVLEYAPAKRGQPADQLFVPMDSLDLLSKYVGGEKPSLSKMGGSD
WKNTKKKARAAVREIAGELVELYAKRQSAPGHPFAPDSPWQHEMEDNFPYVETEDQMMAI
EAVKADMEKPVPMDRVIVGDVGYGKTEVAVRAAFKAVQDGKQVVVLVPTTLLAQQHLSTF
DERMAGFPVNLRGLSRFTSTIEAKETIKGLADGTVDIVIGTHRLLQTGIQWKNLGLVIVD
EEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPILTY
VGAQEDKQIAAAIRRELLRDGQVFFVHNKVSDIEKKARDLRDLVPEARIVVAHGQMSEEL
LEQTVQGFWDREFDVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRER
GYAYFLYPKGQTLTENSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAQQSGHIAG
VGFDLYVRLVGEAVEAYRALADGKIIDATDDGPKEIRIDLPVDAHIPESYINAERLRLEV
YRKLAASQSNADLILAVEEMEDRYGPLPEEVKRLLAVARLRHLARSAGISDIGVQGTRIK
IHPVELPDSKQVRLKRLLPSATYRAAAKAIQLSFPKEGRNVTDKPLRDVALLQWVADFLS
EMFEIPRISVTGEAVPEKIISVGESPSPGRARTAQRTVTRRSERNDDEDYEDKREARRRK
YRMR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtcaactgataacgcagccgctaacagccaccatcccgccatgcttgcggggcta
ctcaaagttgcggcgacagaccccaaaatcaagggactgctggaacacgttggtgaccca
gcgctgcatattaccggcatagatcaatctcgtccctgggctatcggagcgttatcacac
cgagccccagtactcgttatcacggcgaccgggcgtgaagccgaggatctcactgcggaa
cttcgggcaatgctgggggactctgtagcctggttccccgcatgggagactcttcctcac
gagcgtcttagcccagctgccgatgttgcgggtcagagggctaggatcttgtcccatctg
aatgatctgcgcgtggtggtgacagccgcacgcggcattagtcaaccgattcttcaggac
gcagaggggcgtaatgccctccttcttgaggctgaaaaagattatgacttagaagagctc
actcgacagctcgtttttagggcttatcagcatgttgatcttgtggctaagcgcggggag
tttgctacccgaggcggaatcctcgatatattccccacgacgatggatcgacctgttcgc
ttagaattctggggagacgagatcacggagatccgggaattctcagtggctgaccagcgg
gcaatcccggattcttcccacggagctgtggaaattttccctgctcgcgaactcctggtc
acacccgccgtggcagagcgcgccggcgatttagcgttgaagtatcagggaaaccccacg
ctgcaagaactcttatccaagctggcggagggcacccctgcggacggtatggaagcgctt
atcccagcgctcgtagatacccctttggttacactccctgagctcatgccacagggcaca
cacgtgatagcagtcggcccagaaaaaattcgcaccagggtggcggatttgcaggccacc
gacgcagagttccttgcagcgggatgggaggccgcagcaatgggtgccgctgggccggtt
gctgcccaaggactagacctagaagctagctcttatcgctcgtatgagtctttagaaata
tccgcgcgccaggcggggtgctcatggtggacctttgcgccttccggcatgtttgaagca
gacgatgcggacactcttcccctcgactttgaagcaggtcccaccccgcgcggtgatctc
tctcagattgaagagatgatgtccctgctgctagcccataccaccgcaggcggtagggct
gcctttatcgccccagctaagggtgcgatcaaacgcatggtggataggttcaaagaaaaa
ggcatccccacaaaggtagccacaccgggctgggagcccacgccgggagaagtgactctc
taccaggcgcttagccacgcgggcctcgtctttcccaaagtccgtaaaaaagctggaacc
gaggcattgcctcttgtcgtcgtcacagagaccgatctcaccggtaaccgcgtgggcgat
atcgcaggagcaaagcgtcgtccagctaaacgacgcaaccgcgtagatccgctcgcgctg
aagaccggcgactttgtggtgcatgaaacccacggcatcggtcgattcctcaaaatgact
gagcgcacgattacgtcaggggacgagacctcgcgacgggaatacatcgttctggaatac
gcaccggcaaaacgcgggcagcccgcagatcagctttttgttcccatggactcccttgat
ctcctgagcaaatacgtgggaggcgagaaaccctcgttatccaagatggggggctccgat
tggaagaacactaagaaaaaggcccgcgctgcagttcgggaaatcgccggtgaactcgtt
gagctttatgccaagcgacaatccgcgccgggacacccctttgcacctgattccccctgg
caacatgagatggaagacaactttccatacgttgaaactgaagaccagatgatggccatc
gaggcggtcaaagcggatatggaaaaacccgtccccatggatcgcgtcatcgtaggagac
gtggggtacggcaagacagaagttgctgtgagggccgcttttaaggctgttcaggatggc
aaacaagtggtagtcctcgttcctaccacgttgctagcgcagcagcatctgtccacgttt
gatgaacgtatggccggattcccggtgaatctgcgtggcttaagccgttttacctccacg
attgaagcaaaagaaaccataaaagggcttgccgacggcaccgtggatatcgtgatcggt
acgcatcgcctgcttcaaacaggaattcagtggaagaacctcggactggtcatcgtcgat
gaggaacaacgttttggtgtggagcataaagaacacatcaaagcactgcgtactcatgtc
gatgtgctgacaatgtctgccacaccgatcccacgaactttggaaatgtctatggctggg
atccgcgagatgtcgaccattttgactcctcccgaggatcgccaccccatcttgacgtat
gttggcgcacaagaagataaacaaatcgctgcagctatccggcgcgaattgttgcgtgac
ggccaggtgttctttgtacataacaaggtctccgatattgaaaagaaagctagagacctg
cgagacctagtgccggaagctcgtattgttgttgcgcatggtcagatgagtgaggaacta
ctggaacaaactgtccaggggttctgggatcgtgaatttgatgtgctggtgtgcaccacc
atcgtggagactggtttggatattgccaatgccaataccctcatcgtggagaacgcacat
catatgggactttcgcagcttcatcagctgcgcggacgcgtagggcgttcccgggaacgt
ggttacgcgtacttcctgtatcccaagggacaaacactgacggaaaactcctacgaccgc
ctggccaccatcgctcagaacaacgatttgggtgctggtatggcagtggccatgaaagac
ctggaaatgcgaggcgccggtaacgtacttggtgcgcagcaatctggccatatcgcaggc
gtaggatttgatctttatgtgagacttgtcggtgaagccgtggaggcctaccgagccctt
gcagacggaaagatcatcgatgccaccgatgacgggccaaaagaaatccgcatcgatttg
ccggtggatgcgcacatcccagagtcgtatatcaacgcagaacgactccggcttgaggtg
tataggaagctggcggcgtcgcaaagcaatgccgatctgatactcgcagtagaagagatg
gaggatcgctacggaccattgcctgaagaggtcaagcgcctcctggctgtggcccggcta
cggcacctcgccagatccgcgggcatcagcgacattggtgtgcagggaacgcggatcaag
atccatccggtggaactcccagattccaaacaagtccggcttaaacggctactgccttcc
gcgacataccgcgctgcggctaaggctatccagctgtcctttcctaaggaggggcgaaac
gttaccgataagccgcttcgcgacgttgccctgctccaatgggtagcagacttcctatcg
gaaatgtttgaaataccacgcatctcagttactggggaagccgtgcctgaaaaaatcatc
tccgtgggggaatcacccagccctgggcgggcgcgcactgctcaacgtaccgtcactaga
cggagcgagcgtaatgacgacgaggactatgaggacaaacgtgaagcgcgtaggaggaag
tatcggatgcgttga
DBGET
integrated database retrieval system
