Cupriavidus malaysiensis: BKK80_14930
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Entry
BKK80_14930 CDS
T04978
Name
(GenBank) ATP-dependent exonuclease
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cup
Cupriavidus malaysiensis
Brite
KEGG Orthology (KO) [BR:
cup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cup03400
]
BKK80_14930
Enzymes [BR:
cup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK80_14930
DNA repair and recombination proteins [BR:
cup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BKK80_14930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOZ06976
LinkDB
All DBs
Position
1:complement(3307414..3311043)
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AA seq
1209 aa
AA seq
DB search
MSVHAYLRDGLPVGEAEFTAAACDPARSVVVEACAGSGKTWLLVARLLRLLLAGAAPHEI
LAITFTRKAAEEMRDRLLEILAQLAQGADDEVLAALRLRGLSDAEARAALPRARTLHARV
LAAPGRMAIDTFHGWFGTLLRGAPLSSGIVPGASLREDALRLRREAWAPFWRSLGAPQYA
ELRQAYETLVDAIGEFQARAWLDAMFHARSEWWALQEAGPPELALAEQLGDDARLDVVAQ
ALLEDGWLADGQALATRLGGGGKTEQNHAARLEEGLSAVRAWREGGAHEGEPAAQAFARL
RAAFFTAAGAPRALRRTSGLAKAAGGEAMVDALLQAHAGLCEQLDELAARRCEAAVLALN
LAVYRLGDALLQRYQQLKHEQRAMDFADLEWLAARLMADEETATYLQVRLDARYRHLLLD
EFQDTNPLQWRILQGWLAGYAGTGQRPSIFLVGDPKQSIYRFRRADARLFESAREMLQRE
FGATVLRTNRTRRNRPAVLDWVNAVFDAAREQGRYPLYETQTTALPGQGGPLWLLPLVEP
EAAPGKAETGEDGSSETGTQAGEPPDAQADAGGHRDTLREPRSAGGDSLRLEEGRRVAAW
LQRLRATVMVQDHAGERPVRWSDIYLLVRRKSYLPDYERALREAGIPCLSPRRGGLLATL
EALDLSALLAFLMTPESDLDLAHVLKSPLVGASDDDLVALAQQPGEGGWWARLQAGGVPE
GASAALGEGVARLRGWLAIAPQRPVHDLIDHIYHSGEVRRRYAEAAPASIREQVLANLDA
FLKLSLDLDGGRYPSLPKFIDELHEIRRGDETESPDEGGMSDDPEQDAADAADGRGLDAV
HILTVHAAKGLEAPFVVLLDANHSEPAADRSGILVDWPPQAQVPRHFSAYGKRSERGRAR
APLFETEAALAERENWNLLYVAMTRAQQGLLVSGVKGRAARAAEEGNDAEIAGSWYVRLQ
AAGVAEAVAARPGEGASPAGEGARAAPQAVRYTDFRTRYRDAERLAARAGTAEAAEGAEG
AEDVVQEEAIVFDAAAARHGELLHALLERLTRYPHAFGAVPAVETVLRWFPLAGVGSAQA
RELWRRQAQAAVDAARAMLDAPALAALLSGRGALSARNEVELYDARGRLLRIDRLVEYPE
RVVIIDYKLRLLPQEHADYAAQLGRYAAALGPMFPGRRIEAGVATADGEWIPLERLRAGA
RQPQQGSLF
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcatgcctatctgcgtgacggcctaccggtcggcgaagccgagttcaccgcc
gctgcctgcgatcccgcccgttcggtggtggtcgaggcctgcgccggcagcggcaagacc
tggctgctggtggcgcgcctgctgcgcctgctgctggccggcgcggcgccgcacgagatc
ctcgccatcaccttcacgcgcaaggcggcggaggagatgcgagatcgcctgctggagatc
cttgcccagctcgcgcagggggcggacgacgaggtactggcggcattgcggctgcgcggc
ctgagcgacgccgaggcgcgcgccgcgctgccgcgcgcgcgcaccttgcacgcacgcgtg
ctggcggcgccgggacgcatggcgatcgataccttccacggctggttcggtaccctgctg
cgcggcgcgccgctgtcctccggcatcgtgccgggagcgtcgttgcgcgaggatgcgctg
cggctcaggcgcgaggcctgggcgccgttctggcgctcgctcggcgcgccgcagtatgcg
gagctgcgccaggcctacgagacgctggtcgacgccatcggcgaattccaggcgcgcgcc
tggctcgatgccatgttccacgcacgcagcgaatggtgggcgctgcaggaggccggtccg
cccgagctggcgctggcggagcagctcggcgacgacgcgcgcctcgacgtggtggcgcag
gcgctgctggaagacggctggctggccgacggccaggcgttggccacgcgcctgggcggc
ggcggcaagaccgagcagaaccatgccgcgcgcctcgaggaggggctcagcgcggtacgc
gcctggcgcgagggcggcgcgcacgaaggcgagccggccgcccaggccttcgcgcgcctg
cgcgccgctttcttcaccgcggccggcgcgccgcgcgcgctgcgccggaccagcggcctg
gccaaggccgccggcggcgaagcgatggtggatgccttgctgcaggcgcatgcgggactg
tgcgaacagctcgacgaactggccgcgcgccgctgcgaggcggccgtgctggccttgaac
ctggccgtctaccgcttgggcgatgccttgctgcagcgctaccagcagctcaagcacgag
cagcgcgcgatggactttgccgatctcgaatggctggcggcgcgcctgatggcggacgag
gaaaccgccacctacctgcaggtccgcctcgacgcgcgctaccgccatctgctgctcgac
gagttccaggacaccaatcctctgcagtggcgcatcctgcaaggctggctggccggctac
gccggcaccgggcagcgcccgtcgattttcctggtcggggatccgaaacagtccatctac
cgcttccgccgtgcggatgcgcgcttgttcgagagtgcgcgcgagatgctgcagcgcgag
ttcggcgccaccgtgctgcgcaccaatcgcacgcgccgtaaccgtccggcggtgctggac
tgggtcaatgcggtgttcgatgccgcgcgcgagcaggggcgttaccccctctacgaaacg
cagaccacagccttgccgggccagggcggtccgctgtggctgctgccgctggtggagccc
gaggcggctccaggcaaggcggagacgggcgaagacggaagctcggaaaccggcacgcag
gccggtgagccgcccgatgcgcaggccgatgccggcgggcatcgcgatacgctgcgcgag
ccgcgcagtgccggtggcgactccctgcgcctcgaggaaggcaggcgcgtggccgcctgg
ttgcagcgcctgcgcgcgaccgtgatggtgcaggaccacgcgggtgagcgcccggtgcgc
tggagcgacatctacctgctggtccggcgcaagagctatctgcccgactacgagcgggcc
ctgcgcgaggccggcattccctgcctgagcccgcgccgcggcggcctgctggccacgttg
gaagcgctcgacctgtcggcgctgctggctttcctgatgacgcccgaatcggacctcgac
ctggcgcacgttctgaaaagcccgctggtcggcgcctccgacgacgacctggtcgcactc
gcgcagcagccgggcgagggcggctggtgggcgcgcctgcaggccggtggcgtacccgag
ggtgcctccgccgcgctgggcgagggcgtggcgaggctgcgcgggtggctggcgatcgcg
ccgcagcggccggtgcacgacctgatcgaccacatctaccacagcggcgaggtgcggcgc
cgctacgccgaggccgcgccggccagcatccgcgagcaggtgctggccaacctggacgct
ttcctgaagctgtcgctcgatctcgatggcggccgctatccgagcctgccgaagttcatc
gatgaactgcacgagatccggcgtggcgacgagacggagagcccggacgagggcggcatg
agcgacgatcccgaacaggacgcggccgacgccgccgacggccgggggctggacgccgtg
cacatcctgaccgtgcatgccgccaaggggctggaggcgcccttcgtggtgctgctcgat
gccaatcacagcgagcccgcggccgaccgcagtggcattctggtcgactggccgccacag
gcgcaggtgccgcggcatttctcggcctacggcaagcgcagcgagcgcggccgcgcccgc
gcgccgctgttcgagacggaagccgcgctggccgagcgcgaaaactggaacctgctctat
gtggccatgacgcgcgcgcagcaggggctgctggtcagcggtgtcaaggggcgcgcggcg
cgcgccgcggaggaaggcaacgatgccgagatcgcgggcagctggtacgtacggctgcag
gcggccggcgtggccgaggcggtcgcggcgcgtccgggcgaaggcgcctcgcctgccggc
gaaggcgcgcgcgcggcgccgcaagccgtgcgctacacggacttccgcacgcgctaccgc
gatgccgagcggctggcggcacgggccgggaccgcggaggcggcagagggcgcggaaggt
gcggaagacgtagtgcaggaggaggccatcgtcttcgatgccgccgccgcgcggcatggc
gaactgctgcatgcgctgctggaacggctgacgcgttatccgcatgcgttcggcgcggtt
cccgcggtggagacggtgctgcgctggttcccgctggccggcgtgggcagcgcgcaggcg
cgcgagctgtggcgccggcaggcgcaggccgcggtggatgccgcgcgcgcgatgctggac
gcgccggcgctggcggcgctgctgtcggggcgcggcgcgctgagcgcgcgcaatgaggtc
gaactgtacgatgcgcgcggcaggctgctgcgcatcgaccggctggtcgaatacccggag
cgcgtggtcatcatcgactacaagctgcgcctgctgccccaggagcatgcggactatgcc
gcccagctcgggcgctatgcggccgcactcggcccgatgttcccggggcggcgcatcgaa
gccggagtggccacggccgacggcgagtggattccgctcgagcgcctgcgcgccggcgca
cgccagccgcagcagggctcgctgttctga
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