Corynebacterium variabile: CVAR_1746
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Entry
CVAR_1746 CDS
T01594
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cva
Corynebacterium variabile
Pathway
cva00470
D-Amino acid metabolism
cva00550
Peptidoglycan biosynthesis
cva01100
Metabolic pathways
cva01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CVAR_1746 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVAR_1746 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CVAR_1746 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cva01011
]
CVAR_1746 (ddlA)
Enzymes [BR:
cva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CVAR_1746 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cva01011
]
Precursor biosynthesis
Amino acid ligase
CVAR_1746 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
ATP-grasp_4
ATP-grasp_3
Flg_bbr_C
Motif
Other DBs
NCBI-ProteinID:
AEK37098
UniProt:
G0HBI5
LinkDB
All DBs
Position
complement(2008390..2009487)
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AA seq
365 aa
AA seq
DB search
MSNTEPTSPAARTVVAVLYGGQNSEHSISCLSAAAVMSHLDPDRYEVVPVGITETGMWVK
GTTDTEALSAHGRDLPTVKMSRGVHLVPGSFASGRGQLRYGDGSLYAEVDVIFPVLHGRN
GEDGTVQGVLELSNVPYVGNGVLASAACMDKQYTKLIARAAGVPVGDEVVLTERRDLTDE
EKEMIGLPVFVKPARGGSSVGISKVSDWADLDAAEAHAFEHDTKILVEAMLHGVEVECGV
LQYPDGTVHASQPSLLEGTEDGPEGFYGFDTKYLDDIISYEIPAPLPEGQADAVRRWAVE
TFRALDCEGLARVDFFVTEDGPVLNEPNTMPGFTPISMYPKMFEATGVAYTELLDILIAR
ALVRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacactgaaccgacatctcccgccgcccgcaccgtcgtcgccgtcctctacggc
ggccagaactccgagcacagcatctcctgcctgtccgccgccgcggtgatgagccacctc
gaccccgaccgctacgaggtcgtccccgtcggcatcaccgagaccgggatgtgggtcaag
ggcaccaccgacaccgaggcgctctccgcccacggccgggacctgccgaccgtgaagatg
tcccgcggcgtccacctggtcccgggctccttcgcctccggccgcggccagctccgctac
ggcgacggttccctctacgccgaggtcgacgtcatcttccccgtgctccacggtcgtaac
ggtgaggacggcaccgtccagggcgtcctcgaactgtcgaacgtgccctatgtcggcaac
ggcgttctcgcctccgccgcctgcatggacaagcagtacaccaagctcatcgcccgcgcc
gccggcgtgccggtcggcgacgaggtcgtgctcaccgaacgtcgcgacctcaccgacgag
gagaaggagatgatcgggttgccggtcttcgtcaagcccgcccgcggcggctcctcggtc
ggcatatccaaggtcagcgactgggcggacctggatgccgccgaggcacacgccttcgag
cacgacaccaagatcctcgtcgaggccatgctccacggtgtggaggtcgagtgcggtgtg
ctgcagtaccccgacggcaccgtccacgcctcccagccgtccctgctcgagggcaccgag
gacggcccggagggcttctacggcttcgacacgaagtacctcgacgacatcatcagctac
gagatccccgccccgctgcccgagggccaggccgacgcagtccgccgctgggccgtcgag
accttccgcgcgctggactgtgagggcctggcccgggtggatttcttcgtcaccgaggac
ggccccgtgctcaacgagccgaacaccatgcccgggttcaccccgatcagcatgtacccg
aagatgttcgaggccaccggggtggcctacaccgaactgctcgacatcctcatcgcccgc
gccctggtgcggaagtag
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