Charadrius vociferus (killdeer): 104282972
Help
Entry
104282972 CDS
T08577
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvf01002
]
104282972 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104282972 (USP4)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104282972 (USP4)
Peptidases and inhibitors [BR:
cvf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104282972 (USP4)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104282972 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
UCH_1
DUSP
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
104282972
NCBI-ProteinID:
XP_009879407
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MAAMLPVDQLVWVLTGADSNHSNPETQSLKEHLIDELDYVLVPTEAWNKLVTWYGCIDGQ
QPIVRKVVEYGLFVKHYKVEVYLLELKLCESSDPDNVISCHFSKADTVATIEKEMRKLFN
IPAEKETRLWNRYTSNTYEQLSKLDSTVQDAGLYQGQVVLIEVKNEDGTWPGQHFLAKGS
GFVCNSYNCRDSASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQ
NNPLGMRGEIAEAYAELIKQMWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVC
PKCSKVSVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQHRPVQYRVVVPMMGAISDLCES
LSKLSGVPAENMVVTDVYNHRFHKIFQMDEGLNHIMPKDDIFVYEVCKPSEDGSEYVTLS
VYFREKTMRQSSNTSGTILFGQPLLISVPKHKLTVDHLYSVVLEQISRYVKLPLDEYSTP
CLDKGTCNGSNGVVEGDIEEMEHQDGGQEGKEKLAEVDPCHSEGCMQIETPRDLQPCKKQ
HFTFSLVNSSGTSEINSIVEGKILKLNAFSALAIDWDSDTRRLLFDEQEAQAFEKHGSML
QPQKKKAVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKR
FSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAMGVGHYTAYAK
NKVNDKWYYFDDSSVSVASEDQIVTKAAYVLFYQRRNSEEHTAPSPPQEECDGMDTN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgttgcccgttgatcagctcgtgtgggtgctcacaggggctgactcaaac
cactcgaatccagaaactcagagtttaaaagaacacctcatcgatgagctggattacgta
ttggttcccaccgaagcctggaacaaactagtaacgtggtatggctgcatagatggacag
cagcctattgtgagaaaagtagtggaatatggtctgtttgtgaagcactataaggttgaa
gtttatcttcttgagctgaagctgtgtgagagcagcgatcctgacaatgtaattagctgc
cactttagcaaagcagatactgttgctaccattgagaaagaaatgagaaaactatttaat
atcccagctgagaaggaaactaggttatggaacaggtacacgagtaacacttatgagcag
ctcagcaagctggatagcactgtgcaagatgcagggctctatcagggtcaggttgttcta
atagaagtgaaaaatgaagatggcacatggcctggacagcatttcctggcaaaaggttct
ggatttgtttgtaactcttacaactgcagggacagtgcttccctgtcacaacctggactc
tgtggactcagtaaccttggaaacacctgcttcatgaattctgcgttacagtgtctgagc
aatacccctcctctgactgactatttcctggaagataagtatgaagctgaaataaatcag
aacaatccactggggatgagaggagaaattgcagaagcctatgcagagctcattaaacag
atgtggtctgggagacagtctcacgtggccccacgtatgtttaaaacacaggttggccga
tttgctcctcagttttcaggataccagcagcaggattcccaggagctcttggcttttctt
ctggatggtttgcatgaagatttgaacagagtgaagaagaagccctacttggagctgaag
gatgccaatggcagacctgattcggaggtcgcgaaagaggcctgggagaatcataggctg
aggaatgattctatcattgtggatatttttcatggtcttttcaaatctacccttgtttgt
cccaaatgctccaaggtttctgtgacctttgatcccttctgttacttaactcttccactg
cccttgaggagagatcgtcttatggaagttaccctggtatatgcagacccacagcataga
cctgtccagtaccgggttgtggtgccgatgatgggggccatctcggatctgtgtgaatcg
ctctccaaactctctggtgttcctgcagaaaatatggtggtgacagacgtgtataatcat
cgattccacaaaatcttccaaatggatgaaggtttaaatcatatcatgccaaaagacgac
atctttgtatatgaagtttgcaagccaagtgaggatggctcggagtatgttactctctct
gtttactttcgggaaaagacaatgaggcaatccagcaatacttcagggaccatactcttt
ggtcagccactattaatatctgtgccgaaacacaagctcactgtggatcacttgtacagt
gtggttttggagcagatcagccgctatgtgaaactccctttggacgaatactctacaccc
tgcctagacaagggaacctgcaatggctccaatggtgtggttgaaggtgacattgaagag
atggagcaccaagatggtggccaggaaggcaaggaaaagctggcagaagttgatccctgc
cactctgagggttgtatgcagatcgagacaccgagagacctgcagccttgcaagaagcag
catttcacttttagcctcgtgaattcctctgggacctctgagataaactccattgtagaa
gggaaaatcttaaaactgaatgctttttctgcgcttgctattgactgggattccgataca
cggaggctactttttgatgaacaggaggcacaggcatttgaaaaacacggaagtatgtta
caaccacagaagaagaaggctgtcgtagccctcagagactgcatcgagctcttcactact
atggaaacgcttggtgaacatgacccatggtactgccctaactgtaagaagcatcaacag
gctacaaagaagtttgacttgtggtctttgcccaggattttggtagtgcatttaaaacgc
ttctcatacagcagatactggagggataaacttgacactgttgtggaattccctatcagg
ggtttaaacatgtccgagtttgtctgtgacccaagagcaggctcatacgtgtatgacctc
attgcggtttccaatcactatggagccatgggagtaggccactacaccgcctacgcaaag
aacaaagtgaatgacaagtggtactattttgatgacagcagtgtatcggtggcttcagaa
gaccaaatagtgacaaaagctgcatatgtgctgttctaccagcgccgaaacagcgaggaa
catactgccccatctcctccccaagaagagtgcgacggcatggataccaactaa
DBGET
integrated database retrieval system
