Charadrius vociferus (killdeer): 104283979
Help
Entry
104283979 CDS
T08577
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104283979 (SRRM1)
03015 mRNA surveillance pathway
104283979 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104283979 (SRRM1)
03041 Spliceosome [BR:
cvf03041
]
104283979 (SRRM1)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104283979 (SRRM1)
Spliceosome [BR:
cvf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104283979 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104283979
NCBI-ProteinID:
XP_009880539
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MQATAQVEPGFVMIYVKQGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIK
PWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLL
LSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSR
SPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEVTPEPEPSVKPK
ETVVQEATSNSDIPKAPKPEPPVPETKENSPERNSKKEREKEKEKTRQRSPTRSKSRSRS
RSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSA
SLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPR
RSPTPQQSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMA
AADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPR
KRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRY
SPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPGAKRRSPSI
SSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSP
STRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPATKKHQGPPSPTRSRSPS
ANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAA
AAAAVAAADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctacagctcaggttgaacctgggtttgttatgatttatgtgaagcagggaaca
agtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttgaagcagttgaaa
tttgcagaatgcttagaaaagaaggtggacatgagcaaagtaaatctggaagtaatcaaa
ccatggataacaaaacgagtaacagaaatccttggatttgaagatgatgtagtaattgaa
tttatattcaaccagttggaagtgaagaatccagattccaaaatgatgcaaatcaacctg
actggttttttgaatgggaaaaatgctagggagttcatgggagaactgtggccactactg
ttaagtgcacaagaaaacattgccggtattccaactgcatttctggaactgaagaaagaa
gaaataaaacagcgacagatagagcaagaaaaactggcttccatgaagaaacaagatgaa
gacaaggagaagagggataaggaagacaaagacaacagagaaaaaagagacaggtccagg
agtccaagaagacgcaaatcgaggtctccttcccctcgaaggaggtcgtcgcctgtcaga
agagagcggaaacgcagccattctcgctcacctcatcacagaaccaagagccgtagtgca
actcctgcaccagaaaagaaagaggtgactcctgagcctgaaccctctgtgaaaccaaag
gagactgttgttcaagaggcaacttcaaacagtgatatcccaaaagctcctaagcctgaa
cctcctgtaccagagacgaaggaaaattcgccagaacgtaattcaaagaaggagagagag
aaggaaaaagagaagactcgtcaaagatccccaactcggtccaaatcaaggtcaagatct
cgatcacgttctccatctcattctcgaccaagaaggcgtcatagatcacggtcaagaagg
cgaccaagcccaagacgacggccatctccaaggaggaggagccctccaaggcgaatgcct
cccccacccagacacagaagaagcagatcccctgtgaggcggagaagacggtcatcagca
tccttatctggcagtagctcttcctcctcctcctcacgttcccgatcaccaccaaagaaa
ccacctaaaagaactgtatccagtccacctcgtaaaacacgtaggctctctccttcggca
agccctcctaggcgaaggcacagaccatccccaccagcaagtccacctccaaagccacgt
aggtctccaacgccccagcagtcaaatcgtgcaagaaaaagccgtggctctgtttcacct
agcagagcatcagcacccaaacataagagtactgaaaaaagagaatctccttcgccggca
ccgaaaccaaggaaagcagaactgtccgaatcagaagaagataaaggaggtaaaatggct
gcagcggactctgttcaacagaggcgtcagtacagaaggcaaaatcaacagtcttcatct
gattctggttcttcatcttcatctgaagaggaaagaccaaaaagatccaatgtgaagaat
ggggaagttggtagacgccgccgccattcacattcacgcagtccatcaccgtctccacga
aaacggcagaaggaatcctcccctcgtaggaggaggagaagtccatcgccccccccagcc
aggcggcgacgctctccttcgcctgcccctcctcctagacggcggcggtcaccttcatta
cctcgtcgaaggtctccatcaccacccccacgcagacgctcaccttctccgcggagatac
tctccaccaatacagagacgatactctccttctccaccacctaaaagaagaacggcctct
cctcctcccccacctaaacgaagggcatcaccttctccacagtcaaaacgcagagtctcc
cattcaccaccgccaaaacaaaggagctcaccaggcgctaaaaggcgttcaccttcgata
tcttccaagcacaggaagggatctcctcccagtaggtccaatcgggaaacacgttctcca
ccacaaaacaagaggcattcaccttcaccacggcctagagcttctcatacctctgcaagc
ccaccaccaccacgaaggggagcttcagcttcaccccagagaagacagtctccatctcca
agcactagacccatcaggagagtgtcaagaacaccagaacctaagaagacaaaggcttcc
acgccaagtccacgttctgcgagacgggtgtcttcatcacggtctgcatcaggatcacct
gagccagcaacgaaaaaacatcaaggacctccatctcctactcggtctcgttccccttct
gcaaactggtcacctgcaaaaaaggctaaaagcccaactcagagcccatcacctgcaagg
aattcagatcaagaagggggtggaaagaagaagaagaaaaagaaggataagaagcataaa
aaggataaaaagcacaagaaacacaaaaaacataagaaggagaaggctgcagcggctgca
gctgctgctgctgtggctgcagcagataccacctcggcacaggaagaccaggaagcagag
acagaacccaaaaaggagacagaaagtgaaccagaggacaaccttgatgatctagaaaaa
cacctgcgagagaaggcactgaggtcaatgaggaaggcgcaagtgtcaccaccatcctag
DBGET
integrated database retrieval system
