Charadrius vociferus (killdeer): 104286390
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Entry
104286390 CDS
T08577
Symbol
LNX1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104286390 (LNX1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104286390 (LNX1)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104286390 (LNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
104286390
NCBI-ProteinID:
XP_009883281
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSQKEEEMEEGSPPLCVTCGQAHLPEENHLYSYTEEVDDDLICHICLQPLLQPLDTLCGH
TFCAACLTNFLVEKDFCPMDRKLVILQTCRKSSILVNNLLDKLMVSCPFTEHCSEVVQRG
HLEQHFQTQCKGASHYGLTKERKRRSQDCSPDHGSSLAVAALGPELSAAAAIALMTDEPG
LVNPAFSPTSEDSQSGSSPGDLHRSNRNRTRHFERSTIRSRSFKKINKAFSVLRRTKSGS
AVSNHADRERETVGNSAAGEEGFPRLYHLIPDGEITCIKINRTDPHENLAIRIVGGSETP
LVHIIIQHIYRDGVIARDGRLLPGDMILKVNGMDIKNVPHNYALSILKQPCHVLRLTVLR
EQRYRCRNSGLSLDAHCNRDDSFHVVLNKSSPDEQLGIKLVRRADEPGVFIFNLLEGGVA
ARDGQLQENDRVLAINGHDHRYGSPESAAHLIQASEKQVHFVVSRQTRQQTPDILQETGW
SYGGPQPCPTERSNPGKSALHAVTCHEKVVAVRKDHTESLGMTVAGGASNREWDLPIYVI
SVEPGGVISRDSRIKTGDILLNVNGIDLTGVSRSEAVALLKNTNSSVVLKALEMRACEAQ
EERGHLPSPEATQATSESSEWSPSWVMWLGLPRYLYSCKEIVLRRNTAGSLGFSIVGGYE
EHTGNKPFFIKSIVAGTPAYNDGRIRCGDILLAVNGRNTSGMMHACLARMLKELKGKITL
TIVSWPGTFL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaagaagaaatggaggagggctccccgccactctgtgtcacctgcggc
caagcgcatttaccggaagaaaaccacttgtacagctacaccgaagaagtagatgatgat
ctgatatgccacatttgcctgcaacctctgcttcagccgttagacacgctctgtggtcac
accttctgcgcagcctgccttaccaacttcctcgtggaaaaagacttctgccccatggac
cgcaagcttgtgattctccagacgtgcaggaagtccagcatactagtgaataacctcctg
gacaagctaatggttagctgccctttcacagaacactgctcagaggtcgtgcaacgcggt
cacctcgaacagcatttccaaacccaatgtaaaggagcatcccactatggccttaccaag
gaacggaagaggcgttcccaagactgctctccagaccatggctccagcttagcagtagct
gccctgggccctgagctctctgcagctgcggccatcgccttaatgacagatgagccaggg
ctggtgaacccggccttcagccccacctcagaggacagccagtcgggcagcagccccgga
gacctgcatcgcagcaaccggaacagaactcgacactttgaacgctccactataagaagc
agatcttttaaaaaaataaacaaggcgttcagtgtgcttcgaaggacgaaaagtggaagt
gccgtttccaaccacgctgaccgggaaagggagactgttggaaactctgctgccggagag
gaaggttttcccaggttgtaccacctgattccagatggggaaatcacctgcattaagatc
aaccgtacagatccccacgaaaacctggccattaggatcgtgggaggcagcgagactcct
ttggttcacatcattatacagcatatttatcgagatggggtaattgccagagatggaaga
ttgctgcctggagacatgatactaaaggtaaatggcatggacatcaaaaatgtgcctcac
aactacgccctgtcgatcctgaagcaaccctgccacgtgctccgactgacggtgctccga
gagcagaggtaccgatgccgaaacagcggactttcccttgatgctcactgcaatagggac
gacagtttccatgttgtgctaaacaaaagcagcccagacgagcagctgggaataaagctg
gtccgcagggccgatgaaccgggggtatttattttcaacttgctggaaggtggcgtggct
gcccgtgatggacagcttcaggagaacgaccgggtgttggccatcaatggacacgatcat
cggtacggcagcccagagagcgcagcccacctgatacaggccagcgagaagcaggttcac
ttcgtcgtgtctcgacagaccaggcagcagacccccgacatcttgcaggagacaggatgg
agttacggcggtccccagccctgtcccaccgagagaagcaaccccggcaagagcgccctt
cacgccgtcacctgtcacgagaaggtggtggctgtccggaaagatcacacagaatcgctg
ggaatgaccgtagcaggcggagcatctaaccgggaatgggatttgcctatctatgtgata
agtgtcgaacctggaggagttatcagcagagacagcaggataaaaacaggtgacatcctc
ctgaacgtgaacgggatcgacctgacgggggttagccggagcgaggccgtcgccctgctg
aaaaacaccaactcgtcggtggtgctcaaagccctggagatgagagcatgtgaagcccag
gaggagcggggccacctgccatcccccgaggccacgcaggccacctctgagagcagcgag
tggtcaccttcctgggttatgtggctggggctgccacggtatttgtacagctgcaaagaa
atcgtattacgaagaaatacagctggaagtcttggcttcagcatcgtaggaggttatgaa
gaacacactgggaacaaaccattctttatcaaatccattgtggcgggaacaccagcatat
aatgatggcagaattagatgcggcgacatcctccttgctgtcaacggcaggaacacatca
ggaatgatgcatgcctgcttggcaaggatgctcaaagaactgaaagggaaaattactctc
acaattgtgtcctggcctggcacttttttataa
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integrated database retrieval system
