Charadrius vociferus (killdeer): 104287594
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Entry
104287594 CDS
T08577
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvf03041
]
104287594 (RBM39)
Spliceosome [BR:
cvf03041
]
Common components
Common spliceosomal components
General mRNP proteins
104287594 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
104287594
NCBI-ProteinID:
XP_009884618
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRTRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcggagccatgacaggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaaaggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcacccgttctagaagtagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgttccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtattctgcatgcagctg
gctgcaagaattcgaccgagagacctggaagaatttttttctacagtagggaaggttcgt
gatgtacgaatgatttcagacagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgtcagttcagtgcctctggcaatcggactaactggacagagagtcttgggt
gtaccaatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcgttacacttcaat
ataactgaagatatgcttcgaggaatttttgagccatttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgctcaaaaggatatggatttattacgttctcagac
tctgagtgtgccaaaaaggccttggaacaactcaatggatttgagctggctggtcggcca
atgaaagttggacatgtaactgagcgcactgatgcttccagtgctagttcatttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaagacttgcagaaggtactggcttgcagattcccccagctgcacagcaggctctgcag
atgagtggatctttggcatttggagctgtggcagatttgcagacaagactatctcagcag
aatgaagttctggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggataccgaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgtagacaaaaac
tcagctcagggcaacgtctatgtcaaatgtccttcaattgctgctgccattgcagctgta
aatgcgttgcatgggaggtggtttgcaggtaaaatgattacagcagcatatgtacctctt
ccaacgtaccatagccttttcccagattctatgactgcaacccagctactggttcctgtt
cgacgatga
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