Charadrius vociferus (killdeer): 104292743 Help Entry 104292743         CDS       T08577                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04510   Focal adhesion cvf04512   ECM-receptor interaction cvf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cvf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104292743 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104292743 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104292743 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cvf04147]     104292743 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:cvf00536]     104292743 (COL4A1) Exosome [BR:cvf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104292743 (COL4A1) Glycosaminoglycan binding proteins [BR:cvf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104292743 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  104292743 NCBI-ProteinID:  XP_009890461 LinkDB All DBs Position Unknown AA seq 1708 aa AA seqDB search MPMFSAVRGFESTLRLVDEYPFTSQCLGDLLSLLGSAVPRPATQLLWRQDESERKCLHTP GCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEGPPGPPGLKGDTGEPGLPGTKG TRGPPGVSGFPGNPGLPVLPGQDGPPGPPGIPGCNGTKGERGPVGPPGLPGLTGSIGPPG PPGMKGDPGEVIGLLPPSLLKGDKGFPGQPGLPGPPGTPGFQGPMGPQGPPGEPGPPGPP GLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPSPHMKEKGSEIIRGEKGDPGEKGEPG APGFPGSGYKGEKGEPGKPGPRGKPGKDGEPGLKGEPGLPGGFGIPGRPGEPGIKGDKGE RGFPGPPGRVIDPGPVDTFGEKGEPGVSGLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRV GSPGVPGERGEKGEKGSPGFPLPGPPGRDGFPGPPGLPGPPGPPGKTDGVDQCQQGEPGA PGSPGPPGRDGFPGEMGEKGDKGESCDLCDKVGPPGLPGPQGPPGPAGFPGQSGFKGDRG LPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFTYDSILKGEKGDPGFPGQPGIPGREGRP GKDGLPGLQGPKGAAGTAGLKGERGPPGQPGFPGVRGERGFPGPPGIGTAGLPGDKGDRG FAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFPGPQGDKGNPGLPGRPGLPGEK GAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGVPGLQGQKGEPGVGLPGP KGLPGPPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGFRGDPGLPGLQGLQGPPGAPGL GPPGSPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPGPKGDKGSQGQPGVPGSVGLPG LPGPQGAVGLKGSAGAKGEMGVMGTPGLPGTPGPVGDRGLPGEKGSQGFKGVVGPQGDPG VKGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHGATGEKGLRGEYGEPGIPGKDG EPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPG QKGEKGDKGAPGFPGIGFPGSPGEKGEPGRTGSPGLSGDKGEKGSAGIPGMPGAPGPKGS PGMAGFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGA AGAKGEQGIPGRGLPGFPGAKGDKGAKGDVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQ GLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGPPGLKGAKGEQGSNGWPGTPGGPG VKGDPGFQGLPGSPGLPGDIGQKGDMGPPGVPGVPGPKGSPGFPGLKGERGDQGLPGSKG LQGPPGPPGAFQLVKGDPGLPGPVGPVGLKGFPGLPGPKGQQGVTGPSGVPGPPGSPGFD GKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAPSVAHGFLVTRHSQTTEEPSCP FGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSY WLSTPEPMPMNMAPITGDNIRPFISRCSVCEAPAMVIAVHSQTIQIPPCPEGWSSLWIGY SFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERNEM FKKPTPSTLKAGDLRSNVSRCQVCMRKT NT seq 5127 nt NT seq  +upstreamnt  +downstreamnt atgcccatgttcagtgcagtgaggggctttgaatccactcttcggctcgtggatgagtac ccgtttaccagccagtgcttgggcgatctgctgtcactcttgggtagtgcagttccacgc ccagctacccagctcttgtggaggcaggatgagagcgagcggaaatgccttcatactccg ggttgttccggttgtggaaaatgtgactgcagtggagtaaaagggcaaaagggagaaaga ggtttgccgggactacagggtgtgattgggtttcctggaatgcaaggacctgaaggtccc cctggaccgccagggcttaagggtgatactggagaaccaggactgccaggaacaaaggga acaagaggccccccaggagtgtcaggttttccgggaaacccaggccttcctgtactacct ggacaagatggccctcctggtccacctggcattccaggatgtaatggcacaaagggtgaa agaggtccagtaggtcccccaggtttaccaggactgactgggagcataggacccccagga cctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagtttgcta aaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactccaggg tttcagggaccaatggggccacaagggcctccaggagaaccaggtcccccagggccacca ggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaaaag ggagaacaaggggtaaggggccccccaggccccccaggaccatcaccacacatgaaggaa aaagggagtgaaatcataaggggagaaaagggtgatccaggtgaaaagggtgaaccagga gccccaggattcccaggttcaggttacaaaggagaaaagggtgaacctgggaagcctggt ccacgtggaaagcctggaaaagatggtgaaccaggactaaaaggagaacccggtttgcct ggtgggtttgggattccaggacgacccggggagcctggtataaagggtgacaaaggtgaa cgaggtttcccaggacctcctggaagagttatagatcctggaccagtagatacctttggt gaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaaggtgaaaaa ggtttccctggtatacaaggaatcccaggacctccaggtcggccacttccagacagggta ggatcacctggtgtccctggagagaggggtgaaaaaggtgaaaagggttctccgggattc cctttacctggacccccaggaagagatggtttcccaggtcccccagggttgcctggccca ccaggtcctccaggcaaaacagatggagttgatcaatgccaacagggagaacctggtgca ccaggtagtcctggacctccaggaagagatggatttccaggagagatgggagagaaaggt gacaaaggcgaatcctgtgacttatgtgataaagtaggacctcctggacttccaggacca caaggaccaccaggtccagcaggttttccagggcaatcaggtttcaagggtgacagaggc ttacctggacttgatggccttccaggagtacctggcccccccggcactccaggacttatg ggcagccctggggcaaaaggagaaccaggagattttacttatgattctatcctgaaaggt gaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaaggaagacca ggaaaagatggtttgccaggtcttcaaggtccaaaaggagcagcgggtacagctggcttg aaaggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaagaggt tttcctggccctcctgggataggcactgcagggttacctggtgacaaaggagacagaggc tttgctggaaccccaggtttaccaggccttccaggagcaaagggtgaagcaggacgaact gtaccactccctggacctcctggggcagatggccttccggggccacctggtttccctgga ccacaaggtgacaaagggaatcctgggcttccaggtagaccaggcctgccaggagaaaaa ggtgccgttgggcagccaggtatagggttccctggacctccaggacccaaaggtttccaa ggtcagcctggctcgcctggtctaccggggactccaggaacccctggcctggatggtttg ccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgtaggtctccctggccct aagggattgccaggccccccaggcccagctggcatccccggagaaaagggaaatccagga ctgcctggcttacgtggcgagcaaggctttccaggcatacctggacagcaaggattcaga ggcgaccccggcctcccaggactgcaaggcttgcagggccctccgggcgccccggggctg ggcccaccaggatcgccgggacccgctgggcagccaggaccccagggaccgccaggattt cctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatgccaggacca aagggcgataaaggtagccagggtcagcccggagtaccagggtctgtgggattacctggc ttgccaggtccacagggggctgttggactgaaaggatcagcaggagccaaaggagaaatg ggagttatgggaactcctggattgccaggaactcctggaccagttggagatcgagggttg cctggtgaaaaaggtagccaaggtttcaaaggtgtagttggaccacagggtgatcctggt gtcaaaggagataaaggtgaagctggtctcccaggaaaacctggaacgatggacaacatg gacatggttagcctcaaaggccaaaagggagatcaaggagaaaaaggggaccatggagca acaggcgaaaaagggttacgtggggaatatggagaaccaggaattccagggaaagatggt gaaccgggtactccaggacagccaggaccaaaaggtgatcagggccccccagggtaccca ggggatccaggaattccaggacaaaaaggatcggttggtgaaatgggtttgccaggaacg cctggagaaaagggtctgcccggagtaccaggttcaccaggcacaccagggttccctgga caaaaaggtgaaaaaggagacaaaggagcaccaggttttcctggaattggctttccaggg tctcctggtgagaagggagaaccaggaagaacaggtagtccaggtttatctggagataag ggtgaaaagggtagtgcaggaattcctggaatgccgggtgccccaggtcccaaaggatcc cctggcatggcaggatttccaggcaaccctggccgccatggagaaaagggtgaaaaagga cttcctggcttgagcggcattccaggtttaaaaggagaaccaggtgaacctggtgttccg ggtcctgctggttccattggacagaagggtgaaccaggttatgatgggattccaggtgca gctggtgcaaagggtgaacaaggtattccaggtagaggacttccaggatttcccggtgca aagggtgataaaggtgcgaaaggtgatgtgggttttccgggatccccaggaagtccgggg atcccaggcctgaaaggagaaccgggatatgctggtccaccaggccccaagggcagccaa ggtcttcctggactaccaggaagtgcaattgagggccctaaaggagaccgaggaccccaa ggccaacctggccttccaggtttaccaggtccaacagggccaccaggacccccaggtctg aaaggggccaaaggagagcaggggagcaatggctggcctgggactcctgggggtccagga gtcaaaggtgatccgggtttccagggactgccaggtagtcctggtttaccaggagatatt ggtcaaaagggtgatatgggacctccaggagttccaggcgttccaggtccaaaaggatct cctggcttcccaggccttaagggtgagcgaggtgaccaaggtcttcctggatctaaaggt ttacaaggcccaccaggcccaccaggtgcttttcagcttgttaaaggggatcctggctta cctggccctgtaggaccagttggtctcaaaggattcccggggcttccaggtcccaaagga cagcaaggagtgacaggaccttcaggtgtacctggaccacctggtagtccagggtttgat ggtaaacctgggcaaaaaggagaagttggtccttatggtcccccagggcccagaggattc cctggtccacctggccctgaaggtttgcctggtgctatgggcccaccaggtgcaccatct gttgctcatggcttccttgttaccagacacagtcaaaccactgaagaaccatcatgtcca tttggaacaaggctgatttaccatggctactccttgctttatgtacaaggcaatgaaaga gcacatggccaagatctgggcacggcaggaagctgtcttcgtaaatttagtacaatgcct ttcttattctgcaatatcaacaacgtatgtaactttgcatcaaggaatgactattcctac tggctgtccactcctgaacccatgccaatgaatatggctcctatcactggtgataatatc agaccattcatcagcagatgctctgtgtgtgaagctcctgctatggtaatagctgttcac agtcaaacaattcaaataccaccatgtcctgaaggctggagttcactttggattggttac tcctttgtcatgcacaccagtgctggtgcagagggctctggccaggccctggcgtctcct ggttcctgtctagaggagtttcgcagcgctcccttcattgaatgccatggccggggcacc tgcaattattatgcaaatgcttacagcttctggcttgccactatagaaaggaatgagatg ttcaagaaaccgactccctcaactttgaaagcaggggatctgcgctcaaatgttagccgt tgtcaagtctgtatgagaaaaacataa

DBGET integrated database retrieval system