Cyprinodon variegatus (sheepshead minnow): 107081988
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Entry
107081988 CDS
T06110
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107081988
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107081988
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107081988
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
107081988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107081988
NCBI-ProteinID:
XP_015225876
Ensembl:
ENSCVAG00000003784
UniProt:
A0A3Q2GAQ3
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQESSGVGAREEHGDLAE
HGRTYRRGSSATLSDLDDITTLPEGLLFDLPLTPEDAGGDYCNLEMLGGSAGSSSSSQSS
PEQSSLDFVDGNHSIKHEYQLLHDSGLFSHAILNPLPQGCSLLEIERIIQSVVKSHVETS
QYSTEELKRMAWNIYNPEETRSYQTKSAEVMWQQCAVQITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFASAQLFKALGCDDLVNAVFDLAK
TLSRIQMSEDEMALFSAAVLLSPDRPWLTDVQKIHKLQEKVYVGLQRCLQKEGASEEKLA
KMVSKLPMMRSICNLHVDKLEFFRLVHPETAYAFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagttattccctgtaaaatctgcggagacaaatcatcaggcatt
cactatggtgttatcacctgcgaaggctgcaagggtttctttcgacgtagccagcaaaac
aacgccatgtattcctgttcaagacaaagaaactgcctgattgaccggaccaaccgtaac
cgctgtcagcactgccggctgcagaagtgtcttgctcttggcatgagtcgcgatgctgtg
aaatttggtcgcatgtccaaaaagcaaagggacagcctgtatgcagaggtccagaaacac
cagcagtcacaagagagctcgggggttggtgcccgagaagagcatggcgacctggcagaa
catggccgcacctacagaagaggctccagtgccactctgagtgacctggatgacatcaca
accctgccggagggtctgctttttgacctgccgctgaccccggaggacgcaggtggagat
tactgcaacctggaaatgcttggaggaagcgcagggagcagctcttcctctcagagctct
ccagagcagagcagcttggactttgttgatggcaaccacagcatcaaacatgagtaccaa
ctgttgcatgattcaggactcttctctcatgccatcctcaaccctctgccacagggctgc
tccctgctggaaatagagcgtataatccagagtgtggtgaagtcccatgttgaaacaagc
cagtacagcacagaggagctgaagagaatggcgtggaacatctataacccagaagagaca
cgctcataccagactaagtcagcagaagtgatgtggcagcaatgcgcggttcaaattacc
aacgcaatccagtatgtggtggagtttgcaaagcgcatctctggcttcatggacctctgt
cagaatgatcagattattctccttaaagcaggctgcatggatgttctcctgatccgtatg
tgccgagcctacaaccccatcaataatacaatgctctttgatggaaagtttgcaagtgct
cagctttttaaagctctgggctgtgatgaccttgtgaatgctgtgtttgacttagcgaaa
acgctgagtcgtatccagatgtcagaggatgagatggctctgttcagcgccgctgtcctg
ctgtcaccagaccgaccttggctcacagatgtccagaagatccataaactgcaggaaaaa
gtttatgtgggtctgcagcgttgcttgcaaaaagaaggagcatctgaggagaagctagcc
aagatggtgtcgaaacttcccatgatgaggtccatatgtaacctccacgtagataagctg
gagtttttccgcctggttcatcctgagacagcgtatgctttccctcctttgtacagggaa
gtttttgggagtgaaataaccttcccggactccaccgagggctag
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