Cyprinodon variegatus (sheepshead minnow): 107082318
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Entry
107082318 CDS
T06110
Name
(RefSeq) PDZ and LIM domain protein 2-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107082318
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107082318
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107082318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
107082318
NCBI-ProteinID:
XP_015226420
Ensembl:
ENSCVAG00000020546
UniProt:
A0A3Q2EGC1
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MALTLNLSGPAPWGFRINGGRDFKTAITVSKVNAGSKAEQANLKAGDIILEINGENTEDM
LNVEAQNKIKKSKTTLQLVVERPEPPSPQQSNGISTPEQLTGRFQEAVIVSRDENQNYRE
YKISSPTSMSPGPYSSYSTASPDRRGERLTPTLNKSVQLRSWSPEEKNNRVSRPQSQEFF
PSDFRQPSGSSRTPTPPERYSPHSPTDRDVPMSPRRSRTPIPPERYSPHSPTDRDVPMSP
RRSSSSSDFAMQRFDRDSEVYKMIQENKESRAAPRQSNTFKMLQEVLEADEKEAALRFPG
KLSPNAPKQSSSVGGVSKQHTCEKCGTSIVTQAVRISDNCFRHPECYTCTDCGLNLKMRG
HFWSGDAMYCEKHAKERYQSLANSIQTTVSPRQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcactaacattgaacttgagcgggcctgctccatggggcttccgaataaatggagga
agagacttcaaaacggccattaccgtgtcaaaggtcaatgcaggcagcaaagcagagcaa
gcaaacctgaaagccggcgatatcatcctggaaatcaatggtgaaaacacagaggacatg
ctgaatgtggaggcccagaacaaaatcaagaaatccaagaccactctgcagctggtggtg
gagagacctgaacctcccagccctcaacagtccaacggcatcagcacacctgaacagcta
actggacgcttccaggaggcagtcatagtgagtcgtgacgagaaccagaactatagagaa
tataaaatctccagtcccacgtcaatgtccccaggaccctattcatcatattctactgcc
agccccgacagaagaggggaaagactgacaccaaccttaaataagagtgtgcagctgcgc
tcatggtcaccagaggaaaaaaataaccgtgtctccaggccacagtctcaggagttcttt
ccttcagacttcaggcaaccctctgggtccagcaggaccccaacccctccagagcgctac
tcacctcatagccccactgatcgagatgttcccatgtctcctcgccgcagcaggacccca
atccctccagagcgctactcacctcatagccccactgatcgagatgttcccatgtctcct
cgccgcagtagttccagctctgacttcgccatgcaaagatttgacagggactcagaggtg
tacaagatgatccaggagaacaaggagtcccgtgcagcacctcgtcagtcaaacaccttt
aaaatgctgcaagaagtcctggaagctgatgagaaagaggcagccctgcggttccctggg
aagctttcccccaacgccccaaaacaaagctcatctgttggaggagtcagcaaacagcac
acctgtgagaaatgtggcacaagcattgtgacacaggcagtgcgcatctcagacaactgc
ttccgccacccagagtgctacacttgcacagattgtgggcttaacctgaagatgagaggt
cacttctggagtggagatgcgatgtattgtgagaagcatgccaaggagaggtaccagagc
ctagccaactccattcagaccaccgtctccccccgccaatga
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