Cyprinodon variegatus (sheepshead minnow): 107082844
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Entry
107082844 CDS
T06110
Name
(RefSeq) toll-like receptor 5
KO
K10168
toll-like receptor 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04620
Toll-like receptor signaling pathway
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107082844
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107082844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107082844
Pattern recognition receptors [BR:
cvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
107082844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_6
FNIP
Motif
Other DBs
NCBI-GeneID:
107082844
NCBI-ProteinID:
XP_015227212
Ensembl:
ENSCVAG00000021605
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MWTFGLQMVVLGVFIQMEGCFPSCLIAGSIALCAFKNLHSVPPLPPHITHLFLGNNKISE
INTTSLSGLEELQELDLGQQTVQLVIRNNAFSRQRRLRRLVLDSNPGLQLEPLAFAGLSS
IQSLHLNYCSLNESILSGKYLEPLSSLQTLDLNWNQIKRLQPSRFFVNMTDLANLNLELN
QINEICESDLVCFKGKHFTRLSLKGIYLRNISKESFDWMKCGNPFRGMSFQTLDLSNSGL
GVDQLRMFFRAISGTNISHLKISGHIGKGFSFSNLPDPDLHTFEGLKNSSVLSLDLSKSR
IFALRQRVFSPLKEITQINLSQNKVNQIHRKAFEGLQNNLKILNLSHNLLGEIYAYTFSS
LTNLEILDLSHNHVGVLGYGSFTGHPNLKFLDLSDNSLRELGFPASLPNLDILNLKNNRL
ISSSVNTITQFARNISYLNVQNNRLTDLGGVYIFLNQMKRLKQLFYGGNTIKWCTLSRPI
APSNVEVLDLHDSSLQTIWAQGKCLELFQNLGNVTSLNLSSNGLQDLPQGIFKGLTSVLK
MDLSSNALVYLQPGVLPKSLETLYLSDNFIASPNPAAFHALSFLDLSRNRFYCNAGLKSF
LTWMKQTKVKFLTPIEEFRCEFPAGFYKMPLLDYSARLKADRSNT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtggacctttggccttcagatggttgtgcttggtgttttcatacagatggaaggttgc
ttcccatcatgcctcattgcaggctccatcgccctgtgtgcgtttaaaaatctccactcg
gttcctcctctccccccccacatcacccatttgttcctggggaacaataagatcagtgag
atcaacaccacctcgctgtctggtctggaggagctgcaggagctggacctcgggcagcag
acagtgcagctcgtgatccggaataatgccttcagcagacagagacgcctccggaggctg
gtcctcgactccaaccctggtcttcagctggaaccgcttgccttcgccggattgtccagc
atccagagtctacacttgaattactgttcacttaatgagtccatcctgtcaggaaaatat
ctggaaccgctttcatctttgcagactttggacctaaactggaaccaaataaagagactc
caaccgtctcggttctttgtaaacatgaccgatttggctaacttgaatctggagcttaac
caaattaatgaaatctgtgagtcggaccttgtttgtttcaaaggaaaacacttcacacgt
ttgagccttaagggtatctacctgaggaacatctcaaaggagagctttgattggatgaaa
tgtgggaatcctttcagaggaatgtctttccagactcttgacttgtccaacagtggactt
ggtgtggatcaattaagaatgtttttcagagccattagtggcacgaacatatctcacctt
aaaatctctggacacatagggaaaggattctcattcagtaatctcccagatccagacctc
cacacttttgaaggcttgaaaaacagttcagttctctctctggatctgtccaaaagcaga
atatttgcattacgtcagagagttttcagtcccctgaaagaaatcactcaaattaatctt
tctcaaaacaaagttaatcagatacacagaaaagcatttgaaggacttcagaacaatttg
aaaatactcaacctgtcacacaatctgctcggagaaatctatgcttacaccttttcctct
ctcacaaacctggaaattttagatttatctcacaatcatgtgggtgttttgggttatggc
tcatttactggacatccgaaccttaaattcctggatctttctgataactctttgagggaa
ttaggttttcctgcatctttaccaaatttagacatccttaatctgaaaaacaataggctc
atatcctcatcagtgaatactatcactcagtttgcccgtaacatctcctatctgaatgtt
cagaacaacagattaactgacctggggggtgtttacatattcttgaatcagatgaaacgc
ctgaagcagctcttttacggaggtaacactatcaagtggtgcacactcagtaggcccatt
gctccatctaatgttgaagttctggatcttcatgacagctctttgcagaccatctgggct
cagggtaaatgcctggagctgttccagaacttgggaaatgtgaccagtcttaacttaagc
tctaacggtctgcaagatcttcctcaaggcatctttaagggtctcacctcagtgctaaag
atggacctctcttccaatgccctggtatatctccagcctggtgtgttaccaaaaagtctg
gaaaccctctacctctctgataacttcatagcttccccaaacccagctgctttccacgct
ctaagcttcctagatctgtccaggaacagattttattgtaatgctggtctgaagagcttc
ctgacgtggatgaaacagaccaaggtgaagttcctgactcctatagaggagttcaggtgt
gaattccctgctggtttctataagatgccgctgttagactattctgctcggctaaaagca
gatagaagcaatacctga
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