Cyprinodon variegatus (sheepshead minnow): 107083131
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Entry
107083131 CDS
T06110
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107083131 (rnps1)
03015 mRNA surveillance pathway
107083131 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107083131 (rnps1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107083131 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
107083131
NCBI-ProteinID:
XP_015227617
Ensembl:
ENSCVAG00000010868
UniProt:
A0A3Q2E0U2
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MAPSPTKRKEDDKTKDRGKEKTGTKEGDKERGRDKVRKRRSASSGSSSSSRSSSSSSSSS
GSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKTQKRGDD
KDRRKRSPTPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMIDMPMDRLHQHLSKGYAYV
EFETAEEAAKALKHMDGGQIDGQEISAAAVLTQRVRLPPRRLSPPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatcacccaccaaacggaaggaagatgataaaacaaaagacagaggtaaagag
aagactggcaccaaggaaggtgataaggagagaggaagagacaaagtgaggaaacgccgt
agtgcttcctctggtagcagcagcagcagcaggtcaagctcatcatccagcagtagctcg
ggttccagctcaggttcttcaagtggatccagctcttctggttccagccgctctggatcc
tcaagctctcgttcatcatcctcctccagctcctctggctccccaagccccagtcgcagg
cgtcatgacaaccgccgtcgctcccgctcaccctccaaaacccagaagaggggagatgat
aaagaccgaaggaagcgaagccccaccccaaaaccaaccaaggttcacttaggaagactg
accaggaacgtcactaaggaccatatccaggagatcttttctacttatggtaaaataaag
atgattgacatgcccatggataggcttcaccaacacctgtccaaaggctacgcttatgtg
gagtttgagactgctgaggaggcagcaaaggccctgaaacacatggatggaggtcagatt
gatggacaggaaatcagtgcagctgctgtgctgactcagcgggttcgtctgccaccccgt
agattgtctcctcctcctcggagaatgcccccaccaccaccaatgtggcgtcgcagccca
ccacgcatgaggagaaggtcccgctctccaagaaggcggtcccctgtacgccgccgctct
cgctccagatctcccggtcgtaggcgccaccgctctcgctccagctccaactcttccaga
taa
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