Cyprinodon variegatus (sheepshead minnow): 107083307
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Entry
107083307 CDS
T06110
Symbol
tfeb
Name
(RefSeq) transcription factor EB isoform X1
KO
K15590
transcription factor EB
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107083307 (tfeb)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107083307 (tfeb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107083307 (tfeb)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
107083307 (tfeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
107083307
NCBI-ProteinID:
XP_015227913
Ensembl:
ENSCVAG00000005477
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MASRIGLRMQLMRDQLQQEEQRERQQHQQNMAMQYMQQRMAGPPAPTPAISTPQQYQSMQ
VPVEVLKVQTHLENPTDYHIRQSRRQQVKEYLSTTYANKQTVHSVAGLMPPSPPKNMGPA
VSSASAPPPLHSPHMRKEQLMSGNSAPNSPMAMLNIGSNHEKEMDEVIDDIISLQSSYDD
VPGYMDPVQMSNTLPLSSSHLDVYTGPGMKAPAIAMTSNSCPANLTIKRELSDAEARALA
KERQKKDNHNLIERRRRFNINDRIKELGTMIPKTNDLDVRWNKGTILRASVEYIKRMQKD
VQRSREVENNFKRMEMANKQLLMRIQELEMQARLHGLPSTSPSGLNPGEMMPAYIKQETS
PEQNFSHAQQQALHQPQHLPHNQAQPQQHHFLPQPHMHPQNQLQPQPRQLPPMPQHLPPQ
QPIQYPAVGSSQPFDFAQSLDLCDGIPGFSDGMSGLGDLGGLDVQGRRGELSFLMMDEPL
SPMGGDPLLSAMSPEASVDSSRRSSFSIEDGDIM
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgcatcgggctgcgaatgcagctgatgcgggaccagctgcagcaggaggag
cagcgtgagcggcagcagcatcagcagaacatggcgatgcagtacatgcagcaacgcatg
gctgggccacctgcgccaacaccggccatcagcaccccgcagcagtaccaaagcatgcag
gttcccgtggaggttctgaaggtgcaaactcaccttgaaaatccaacagactatcatatc
cgccagtcacggagacagcaagtgaaggaatacctttcaaccacttatgccaacaaacag
acggttcactcagtagcagggctcatgccgccatctcctcccaaaaacatgggacctgct
gtgagttcggcatctgcgcctccacctctccactctccacacatgcgtaaggagcagctc
atgtctggcaacagcgcccccaacagcccaatggccatgcttaacattggctccaaccac
gagaaggagatggatgaggttattgacgacattataagtttgcagtccagctatgatgat
gttccaggatacatggaccctgtccagatgtcaaacactctcccactctccagcagccac
ctggacgtctacacaggccctgggatgaaggcgccggccatcgcaatgacgagtaactct
tgtcccgccaacttgaccatcaaacgcgaactgtcagacgcagaagcccgtgcgctggcc
aaggagagacagaagaaagacaaccacaatctaattgaaagaagaaggagattcaacatt
aatgatcgaatcaaagaactgggcaccatgattcctaaaaccaatgatcttgacgtgcgt
tggaacaaaggtactatactgcgggcgtctgtagagtatatcaaacgaatgcagaaggac
gtgcagaggtccagagaggtggagaataacttcaaaaggatggagatggccaacaagcag
cttttgatgcgcatccaggagttagagatgcaagctcggctgcatggcctgccaagtacc
tccccatccggcctgaaccccggtgaaatgatgcctgcttacattaaacaagagaccagt
ccagagcagaacttttctcatgctcagcagcaagccctccaccagcctcagcacctaccc
cacaaccaggctcagccccaacagcaccacttcctcccccagccccacatgcatccccag
aaccagctccagcctcagccccggcagctgccaccaatgccacagcacctcccaccccaa
cagcccatccagtaccccgcggtgggcagctcccagccctttgactttgcccagtcgctg
gacttgtgcgacgggatacctggattctcagacggcatgtcagggctgggcgacctgggc
ggactggacgtccaggggagaagaggcgagctgagcttcttgatgatggacgagcctttg
tcccctatggggggggacccactgctgtctgcaatgtctcccgaggcgtctgtcgactcg
agccgcagatccagctttagcatagaggatggagacatcatgtag
DBGET
integrated database retrieval system
