KEGG   Cyprinodon variegatus (sheepshead minnow): 107087773
Entry
107087773         CDS       T06110                                 
Symbol
per1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107087773 (per1)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107087773 (per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS Transformer
Other DBs
NCBI-GeneID: 107087773
NCBI-ProteinID: XP_015235000
Ensembl: ENSCVAG00000005799
UniProt: A0A3Q2CH38
LinkDB
Position
Unknown
AA seq 1445 aa
MYIAVLLKIKLLQLNSTTSSYTSMSYDSSTSMPSSSCRGRASGTCDKDREDEVNEQKTTC
PNVSDQEQGGASSLSGDQRESHSDDMDGVSSGNDSGERESEGRAGRDGLCGHQSTPSSHS
HSSSNGKDSGMMLETTDSTKSSNFQSLSPPNGSLAYSLLSHSSEHNPPSTSGWSSDQSAR
LQTQKELMKAIKELKLRLPAERKAKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECH
GCSLDLSTFTIEELDNISSEYTLKNTDTFSMAVSFLSGKVVYVSQQCSSLLRCKPECLQG
IMFSELLAPQDVSTFYSSTAPCRLPPWASCIGSASPPVDCNQEKSMFCRISGDRAQGGEM
RYHPFRLTPYQLTLRDSDAAEPQPCCLLIAEKVHSGYEAPRIPADKRIFTTSHTPNCLFQ
EVDERAVPLLGYLPQDLVGTPILLYIHPDDRPTMVAIHEKIFQFAGQPFDYSPLRMCARS
GEYVTIDTSWSSFVNPWSRKVAFVVGRHKVRTSPLNEDVFTTAMGGESRVTTPDVVQLSE
QIHRVLVQPVHSGGSQGYSSLGSSGSRGSQQQHPSASAASSSESNGPAMDEVAVAASHKP
MTFQQICKDVHTVKTNGQQVFIESRNRPPPRKNTCAGAAGFRTINSDAIRESIADLTQSP
RSLVPAALLQKEPSTGYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSSCTASSTSDEDK
KANSGGHDNGGSVNLVGEPPPLPPLTMASKAESVASVTSQCSFSSTIVHVGDKKPPESDI
VMEEAPPTPTPVTTATHPKPPTTTSLTPAAPISTTTFPSPLPPPPPPPTHPPASQPERDS
WRSGSVGGVAAGGGAPGRLGLTKEVLSAHTQQEEQAFLDRFNDLSRLRVLDQTASLTTRG
QTPPALSRGVRCSRDYPAAGSGTGRRRGRGGKRLKHQESSDQLGSQPLNRQDSRAPAASA
PLNVPIGHSTNSPSWPSAGSQASVPAASFPPGMLPIYPVYPQLPQPLPGYDPTRFPPTQM
VPPMMAFVLPNYMFPQMGMPMSQPGGSGQFYNPTYSFPGMSPVPFQSISNPLPGAGACAP
SRSSTPQSFTQTPADREGAESPLFQSRCSSPLNLLQLEETPSNRLEVATALAASQQAQPS
VQGAAAGVQSSANKRSSEDPSKENENVEAVESNQDAMSTSSDLLDLLLQEDSRSGTGSAA
SGSGSSGTRSSGSGSGSNGCSSSGTSGTISSQGSHTSKYFGSIDSSENDHSRKQPAGGGS
SAGGDGGEDQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRNMETVLQEDREALRNMQKHQ
PRFTEEQKKELGQVHPWIRTGRLPRSINIPGCTGCKCPPSVPPTTPFDVEIHEMELCTAL
KTQEECSSKETAARAETAMDDVQLEDEDEEEEAQRKDPQTQENTEDMVQKEERVEAETVK
DRTET
NT seq 4338 nt   +upstreamnt  +downstreamnt
atgtacatagcagtcctacttaaaattaagttgctccagttaaattctacgacttcatcc
tacactagtatgagttatgacagctccacatcaatgcccagcagcagctgtcggggacga
gcatcggggacctgcgacaaggaccgggaggacgaggtgaacgagcagaaaaccacctgt
cccaatgtctccgaccaggagcagggaggtgcgtccagcctgtccggagaccagagggag
tcgcactcggacgacatggacggcgtttccagcgggaacgactccggggagagggaaagc
gagggcagggctgggagggatggattatgcggacaccaatccacgcccagctcccacagt
cacagctcctccaatgggaaggactccggcatgatgctggagaccaccgatagcaccaaa
agctccaacttccagagtctgtcacctcccaatggctctctggcctacagcctgctgtcc
cacagctcggagcacaacccgccctccacctccggctggagcagcgaccagtcggcccgg
ctgcagacgcagaaggagctgatgaaggccatcaaagagctgaagctccgtctgccagct
gagcgcaaagccaagggccactccagcaccctgaacgctcttaaatacgccctgcagtgt
gtcagacaggtccgagccaacaaagagtactaccaccagtggagcgtggaggaatgccac
ggctgcagcctggacctgtccaccttcaccatcgaggagctggacaacatcagctccgaa
tacaccctgaaaaacacagacacgttctccatggccgtgtctttcctgtcggggaaggtc
gtgtacgtttcccagcagtgttcatccctgctgcgctgcaagcccgagtgcctccagggg
ataatgttttcggagctcctcgctccgcaggatgtcagcaccttctacagcagcacggcc
ccctgccgactgccgccctgggcgtcctgcatcggctcagcttctccccccgtcgactgc
aaccaggagaagtccatgttctgtcggatcagcggcgatcgggcgcaggggggcgagatg
cgttaccacccgttccgcctgacgccctaccagctcaccctcagagactcggacgctgca
gaaccgcagccctgctgcctgctcatcgctgagaaggtccactctggatacgaagctcct
cgtatccctgcagacaagaggatcttcaccaccagtcacactcccaactgcctcttccag
gaggtcgatgagagggcggtgccgcttttgggctaccttcctcaggatttggtagggacc
cccatcctgctctacatccacccagacgacaggccaacgatggtggccattcatgagaaa
atttttcagtttgcaggacagccctttgactactcgcccctcaggatgtgcgcccgcagc
ggggaatacgtgaccatcgacaccagctggtcctccttcgtcaacccctggagcaggaag
gtggcgtttgtcgtcggacgtcacaaagtcagaacgagccccctgaatgaggacgtgttc
accacggcgatgggtggcgaaagtcgagtcaccacgcctgacgtggtccagctgagcgag
cagatccaccgggttctggtccagccggtccacagcggcggctcccaaggctacagctct
ctggggtccagcggttcccgtggctcccagcagcagcaccccagtgcctctgccgcctcg
tccagcgaaagcaacggccccgccatggacgaagtcgccgttgcggcctcgcacaagcct
atgacgttccagcaaatctgcaaagacgtccacacggtcaagaccaacgggcagcaggtt
ttcatcgagtcccggaaccgtcctccgcctagaaaaaacacctgtgctggtgcagctggt
ttcagaaccataaacagcgacgcaatcagagagtcgatagcagacctgactcagtctccg
aggtccctggttcctgctgctctcctgcagaaggagccctccaccggttactcctaccag
cagatcaactgcctggacagcatcatcaggtacttggagagctgtaacattcctaacact
gtgaaaaggaagtgcggctcctcctcctgcaccgcctcatccacgtccgacgaggacaaa
aaggcgaactccggcggccacgacaacggtggttcagttaacctcgtaggtgaaccacct
cctctgcctcccctgaccatggcttcgaaggcagagagtgtagcctcagttacgtctcag
tgtagcttcagcagcaccatcgtccatgtaggagacaagaaacctcccgagtcagacatt
gtgatggaggaggctcctccaactccaacccctgtcactacagctacccacccaaaacct
cccactactaccagcttgactccagctgctcctatcagtacaaccacattcccttctcct
cttcctcctccgcctccccctcctactcaccctccggcaagtcagccggagagggacagc
tggcggagcggaagcgtgggaggtgtggcggcaggaggcggagctccaggccggctgggc
ctgaccaaggaggttctgtctgcccatacgcagcaggaggagcaggccttcctcgatcgc
ttcaacgatctgagcaggctgcgggtcctggatcagacggcgtctctgaccacgcgaggc
caaaccccgcctgcactgtctcgaggtgttcgctgctctcgcgattacccggctgctgga
agcggcacaggccgacggcgaggccgtggaggtaagagactcaagcaccaggagtcgtcg
gaccaactcggttctcagcccctgaatcgtcaggactctagagcacccgcagcctctgcc
cccctaaacgttcccatcggacactcaactaactccccatcatggccgtctgcgggctcc
caggccagcgttcctgccgcttccttcccccctggtatgcttcccatctaccctgtctac
ccacagctcccccagcctttaccaggctatgatcccacacgtttcccccccacccagatg
gtacctcccatgatggctttcgttctgcccaactacatgttcccccaaatggggatgccc
atgtctcagcctggcggctctggacaattctacaaccccacctacagtttccccgggatg
tcccccgtccctttccaatctatatccaatcctcttcccggggcgggcgcctgcgcccca
tcccgcagcagcaccccacagtccttcactcagacgcccgctgaccgcgagggggcagaa
tcccccctcttccagtccagatgctcctctcctctcaacctgctacagctggaggagacg
cccagtaaccggttagaagtggccacagcgttggcagcgtcacagcaggctcagccctct
gtgcagggcgccgcagcaggggtccaaagctccgcaaataagaggagctctgaggatcct
tccaaagagaacgagaacgttgaagctgtagagtccaaccaggacgccatgtccacctcc
agcgacctgctggacctgctgctgcaggaggattcccgctcaggcaccggctcagccgcc
tctggttctggatcctcgggtacacggtcctctggatcaggctctggctctaatgggtgc
agctcctctggaaccagcggaaccatcagcagccagggcagccacaccagcaagtacttt
ggcagcatcgactcctcagagaatgaccactctcgtaaacagccagcagggggcggcagt
agcgcaggaggagacggaggggaggatcagttcatcaagtgtgtgctgcaggaccccatc
tggctcctgatggccaacactgatgacaaggtcatgatgacgtaccagctgcctgtcaga
aacatggagacggtgctgcaggaggaccgtgaagctttgaggaacatgcagaaacaccag
cctcgcttcacagaggagcagaaaaaagagcttggccaggtccatccctggatccgtacg
ggacgtctgccccgatccatcaacatccccggctgcacagggtgcaagtgtcccccctct
gtacctcccaccacacctttcgacgtagagatccatgaaatggagctctgcaccgcgctg
aaaacccaggaagagtgcagcagcaaggaaacggcggctcgcgctgagacggcgatggac
gacgtccaattagaggatgaagacgaggaggaggaggcacaaaggaaagacccccaaaca
caagagaatacagaagacatggtgcaaaaggaggagagagtggaagcagagacggttaaa
gaccgaacagagacttaa

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