Cyprinodon variegatus (sheepshead minnow): 107089127
Help
Entry
107089127 CDS
T06110
Symbol
sema5b
Name
(RefSeq) semaphorin-5B isoform X1
KO
K06841
semaphorin 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
107089127
NCBI-ProteinID:
XP_015237193
Ensembl:
ENSCVAG00000018679
UniProt:
A0A3Q2EEQ2
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MTASSQDSNPLFLAGLFLLLLLLLPAVYTQKSAFPTTPSTPLFDPLTQPECTKKEHPKVS
IQALTPWISTFSQPGVRDYSLLTLDLTRDELIVGARNYIFRLDLRNLSLIQATEWAPDEE
TRKSCQSKGKTEMECQNYIRVLLVNKTEVMTCGTNAFQPLCITREVGNISRVLERVNGVA
RCPYDPRHNSTAVVTESGELYAATVIDFSGRDPVIYRSLGGMPPLRTAQYNSKWLNEPHF
ISAYDIGLFTFFFLRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARLNCS
RSGEIPFYYNELQSTFYLPEQDLIYGIFTTNVNSIAASAVCAFNLSAITQAFNGPFRSQE
NPRSTWLPTPNPIHNFQCGTINDKGPNEGLTERSLQDAQRLYLMNDVVQPESVDPLVMQD
DVRFSNLVVDIVQGMDTLYHVMYISTEYGTILKALATPNKNLQGCYLEEMELQPTGVREP
ILSLQILHSDRSLFVGLKDKVLKIPLERCSSYETETLCLEARDPYCGWDFRQRKCTTLEE
SSNMSQWKQNITVCPLRNQTTDGGFGPWTSWHPCNNDDPLDGVSSCLCRSRSCDSPAPRC
GGKNCDGPTIEVSNCSRNGGWTPWSSWGQCSTTCGTGFEMRQRSCNNPSPRHGGRVCVGP
SRDERFCNEGVSCPQPIFWTPWGSWTKCSTECGGGVHSRVRSCENGNTCPGCALEYKACN
LEACPEVKRNTPWTPWMPVNVTQGGARQEQRMRYMCRAHLADPHELQIGRRKVETRYCPN
DGTVVCETDSLVEELLKAPVVKMAGMSWSSWESWSSCSQSCAKGYRTRRRTCSGPEGKSA
PVACRGSPVEYQDCNVQACPVKGAWSCWSSWSQCSVGCGSGHYQRTRSCNSPAPANGGDI
CIGLHTEEALCNTHTCDGGWMAWSLWSACDDSGFQTRSRMCGAQGNTPCLGNSTQRRDCN
EIPVILPASGFDKDQQCGAFTSIHLIATGVSCFLGAGLLSFLIYVYCQRFHKPSQESAVI
HPTTPNHLNYKGNTTPKNEKYTPMEFKTLNKNNLLPDERSNFYPTPLQQTNVYTTTYYPT
PLGKFDYQPNSSPSPCRTYNNSNNS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtcctcacaggactccaaccccttgtttctggctggcctcttcctcctcctc
ctcctcctcctcccagctgtttacacccagaaatcggctttcccaacaaccccaagcacg
cctttgttcgacccactgacccaaccagagtgtacgaagaaagaacatccaaaggtttcc
atccaagctcttaccccctggatctctaccttctcccagcctggtgtgagagactactcg
ctgctcacccttgacctgactagggatgagcttattgttggtgccaggaactatattttc
agactggatctccgtaacctttccctaatacaggcgacagagtgggcaccggacgaagaa
accaggaagtcatgtcagagcaaaggcaaaacagagatggaatgccagaactacatcaga
gtcctgctggtgaacaagactgaggttatgacctgtggcactaatgctttccagccacta
tgtatcaccagagaggtgggaaacatcagcagagtgctggagcgtgtgaacggtgtggcg
cgttgcccgtacgaccctcgtcacaactccacggccgtggtaacagaaagcggagagctt
tacgctgccactgtcatcgacttctcaggacgcgacccggtcatttacaggagtcttggc
ggcatgcctccgctgcgcacagcccagtacaactccaaatggctcaatgagccccacttt
atctcagcctacgacatcggcctttttaccttcttcttcctgagggagaacgcggtggag
cacgactgcggcaagacagtctattcccgcgtggctagagtctgcaagaacgacatcggc
gggcggttcctcctggaggacacctggaccacgttcatgaaggcgaggctcaactgctcg
cgctctggagagatccctttctactacaatgagcttcagagcactttctacctacctgag
caagatctcatctatggcatcttcaccaccaatgtcaacagcattgcagcctctgcagtg
tgtgccttcaatctgagcgccatcacccaagccttcaatgggcccttccgctcccaggag
aatccccgctccacctggcttcccacacccaaccccatccacaactttcagtgtggtacc
ataaatgacaaaggccccaatgagggtttgactgagcgcagcctccaggacgcacagcgg
ctttacctgatgaacgacgtggtccagcccgagtctgtcgatcctctggtcatgcaagac
gatgtccgcttttcaaaccttgttgtggacattgttcaaggaatggacactctttaccac
gttatgtacatcagcacagaatacggcaccatcctgaaggctcttgcaacgcctaacaaa
aaccttcagggttgttacctggaggagatggagctccagccaaccggtgtccgagaaccc
atcctgagccttcagatcctgcacagcgacaggtcactctttgttggcctcaaagacaaa
gtcctgaaaatcccccttgagagatgttcctcctatgaaactgagacactttgcttggag
gccagggacccttactgcggctgggacttcaggcaacgcaaatgcaccacgctggaggaa
agctccaacatgagccagtggaaacaaaacatcactgtctgtccgctgcgtaaccagacc
actgatggtggctttggaccctggacttcatggcacccctgtaacaatgatgatccactg
gatggtgtgagctcctgtttgtgtcgctccagatcttgtgacagtcccgctcctcggtgt
ggaggcaaaaactgtgacggcccaactattgaagtctcaaattgctcaaggaatggaggc
tggacaccctggtcgtcgtggggacagtgcagcacaacctgtggtacaggctttgagatg
cgccagcgttcctgtaacaacccctcaccccgacatggtgggagagtgtgcgtggggccc
agcagggatgaacggttctgcaatgagggcgtatcgtgtcctcagcctattttttggact
ccatggggctcttggactaagtgcagcacagagtgcggtggaggtgtccattccagggtc
aggtcctgtgagaacggcaacacttgtcccggatgtgcactggagtacaaggcttgtaac
ctggaggcctgtccagaggtaaagaggaacactccttggaccccctggatgcctgtcaat
gtgacccaaggtggagctcgtcaggagcaaaggatgcgctacatgtgcagggcccacttg
gccgatcctcacgagctgcaaatcggacggaggaaagtagagacgcgctactgtccgaat
gatggaacggtggtctgtgagacggatagccttgtggaagagctgttgaaagccccagtg
gtaaaaatggccgggatgagctggtcatcgtgggagagctggtcaagctgctctcagagc
tgtgccaaaggttaccgcacccgtcggcgaacctgttccggaccagaggggaagagcgcc
ccagtggcgtgccgaggctctcctgtggaataccaagactgtaacgtacaggcatgtccg
gttaaaggtgcgtggtcctgctggtcttcctggtcgcagtgctcagtgggctgcggtagt
ggtcactaccagaggacacggtcctgcaacagccctgcccctgcaaacggaggagacatt
tgcataggactgcacacagaggaggccctgtgtaacacgcacacatgtgatggtggatgg
atggcctggtctctgtggtcagcctgtgacgactcaggctttcaaaccaggagtcggatg
tgtggcgctcagggcaacaccccctgcctggggaacagcacccagcgcagagactgcaat
gaaataccagtcattcttccagcatctggttttgataaggaccaacaatgtggagctttc
acctccatccacctaattgccacgggcgtttcctgtttcctcggggccgggctgctgtcc
ttcctgatctacgtttattgtcaacgattccacaaaccctcgcaagagtctgccgtcatt
catccaaccaccccgaaccatctcaactacaaaggcaacaccacaccaaagaacgagaag
tacacacccatggagtttaagacactgaacaaaaacaacctgctgccagatgagagatct
aacttctacccgacgccactccagcagaccaatgtctacacaaccacctactaccccaca
ccgcttggtaaatttgactaccagcccaactcctccccatcaccatgcagaacctacaac
aacagtaacaacagctga
DBGET
integrated database retrieval system
