Cyprinodon variegatus (sheepshead minnow): 107089359
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Entry
107089359 CDS
T06110
Name
(RefSeq) DNA ligase 1-like
KO
K25695
neurosecretory protein VGF
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107089359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cvg04052
]
107089359
Cytokines and neuropeptides [BR:
cvg04052
]
Neuropeptides
Neuropeptides (GPCR binding)
107089359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DRE2_N
Motif
Other DBs
NCBI-GeneID:
107089359
NCBI-ProteinID:
XP_015237589
Ensembl:
ENSCVAG00000005771
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MVMTCQNSPFTARLILLVLLTVTPRLASSAPVWDEKGEGGVQGRTRTDHKEDSSGPILSA
PQPQILPDPFEGLQDQGRGPGQDKYLDKASDPEQVLAVLLESLDHPGDGKILTSRNRDWK
EDKGRKLPSAESVQGGEIRETEQTEGERGKEDDNDKGEADKAIEKVILGHLAVVQADEMK
EKEEEQSATKEERKNEEEEQEEGNNLDELIDKVKSASTSDVDDPSLERKIRGYFQNIDLG
LQDNEILPPLKGYKAYNTQLARAGKKQHWQDNMSSNRPVKGGNFMDDFDEGGEEIEEEVE
EEEESLSHMEEEARARAEKQEILRQQEEAEKAREEEQRLADIASDMLLQYMGRKQQSFMK
PRQKSSNTAEDKRSEEVLPDEDDLDQQMIDRLIEISSKLHLPADDVIEIISDVEEKKKKR
KELQQQPINSNPVIPRFRPLVPPPLATPPIYHYTASKNPKKAPYKHNKSNKKWHKDKIKS
YKQDYWYKPQKQLDYWYKPQKQFLAFPSYPYYQKPYRAYYPVYFPYPKAQYYGKSSPSRD
QSFGPQELDLQPPRRRHRGGGKNLAGQGWRQQPPPRLPLTPYISNYILPHPRTYQPLPPP
KPVIAPRRGRRPPYYYPQVTQVDDYEEDGLVPQLDSEEELENFIERIYMKRRMY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgacctgtcaaaattcccctttcacagctcgccttatcctattggtcctgctc
actgtcactccacgcctagccagctctgccccagtgtgggacgagaaaggggagggaggg
gtgcaggggcgcacacggacagaccacaaagaggacagttcgggccccatcctctcagcc
ccccagccccagattttgcctgacccatttgaaggattgcaagatcaaggccgtggtcct
ggtcaagataaatatttagataaagccagtgaccccgagcaggtgcttgctgttcttttg
gagtctctggaccacccaggggatggcaaaatccttaccagcagaaacagagactggaag
gaggataagggtcggaagctgccctctgctgaatctgtgcagggtggtgagataagagaa
acagagcagacagaaggggagagggggaaggaagacgacaatgataagggggaggctgat
aaggcaattgaaaaggtaattttaggccatttggcagttgttcaggcagatgagatgaaa
gaaaaggaggaggagcaaagtgcaactaaggaagaacgaaaaaatgaagaagaggaacaa
gaagagggaaataatttagatgaactcatagacaaagtcaaatctgcatccacctcagac
gtggatgatccctcattggagcgcaaaatccgaggctacttccaaaacatagacttgggt
ctgcaagacaatgagatcctgcctcctttgaagggctacaaggcatacaacactcagctc
gctcgagctgggaagaagcagcactggcaggacaacatgtctagcaatagacctgtaaag
ggggggaatttcatggacgactttgatgagggaggcgaagaaatagaggaggaggtagag
gaggaggaggagagcctctcccacatggaagaagaagcgagggcgcgtgcagagaagcag
gagattctccggcagcaggaggaggcggagaaagctagggaggaagagcagaggctcgct
gacatcgcctccgacatgctactgcagtacatgggcaggaagcagcagtccttcatgaag
ccacgacagaagagcagcaacaccgccgaggacaagaggtcagaagaggtcctacccgac
gaagacgacctggaccagcaaatgattgataggctgattgaaatcagcagcaagctccac
ctccctgccgacgacgtgattgagatcataagcgatgtggaggagaaaaagaagaaaagg
aaagagttgcagcagcagccaatcaacagtaatccagtcattcctcgctttaggcctctg
gtgccgcctcctcttgccaccccacccatttaccactacacagcttcaaaaaatcccaag
aaagctccttataagcacaataaatccaacaagaaatggcacaaagacaaaatcaagtca
tacaagcaggactattggtataagccacagaagcagcttgactactggtataaacctcag
aaacagtttttagccttcccatcctatccctactaccaaaagccatatcgagcctactac
ccagtttacttcccatatcctaaagcacagtactatggcaagtcatccccttcccgagac
cagtcttttggcccccaagaactcgatctccagcccccaaggcgcaggcacaggggtggc
ggtaagaacttggcgggacagggctggaggcagcagccaccaccacgcctgcctctcact
ccttatatctctaactatatccttcctcacccacggacctaccagcctctgcctcccccc
aaaccagtgattgcccccagaagggggaggagaccaccttactactacccacaggtcacc
caagtagatgactatgaggaagatgggctggtgcctcagctggacagtgaggaggagctg
gagaactttatcgagaggatctacatgaagcgcagaatgtattga
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