Cyprinodon variegatus (sheepshead minnow): 107090411
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Entry
107090411 CDS
T06110
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107090411 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107090411 (nedd1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
107090411 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
107090411 (nedd1)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
107090411 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
107090411
NCBI-ProteinID:
XP_015239262
Ensembl:
ENSCVAG00000011575
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MEEVTRLVSTGDCVKVWDAVSMAPLEQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
LSSLKSAPVPVVELAEGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSCIASGSTSGDLVLYSLTTNLSSRAFGHGSNQPIHDLRLSMVKRSLLGS
VSDSGTVVLWDSNTQRELHVFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIICYDTASRI
ILRAIRVDSPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTKITAAHRTSVTCLRFQ
SNASRQKSSKLASAKISSTKRSSSKLSSSQTDSAPSSGPAPHRQVASTAGGAAPEVMCRE
AEGQPGVEQLVEKFGVVGRNSLDIFSPPREGPESRTQATSGDTPFGRSHVTGSEMLSRDG
EGQPLVGRASLDIFSPVREDSHSGGGQQRKTPLGTQLGATAGRCYSPLSVFQSPLPIKEE
EPMAASAAEPCDRKSDKNSSSSLEVEPQTPPTTSQETNQSQAGAPFYTPELGLRKANGVP
AQLSYDSPVCRTPPTAAAGTASGSAALAAVSSSLSQNIADMVGQDGAAPLTSLQIHFIQN
MIHETLDEFRTACHQDIINLQVEMIRQFYIQLTEIHGLIEKYSVNESLVEEIEKLREENR
RLRANY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcgtctggtgtcgactggagactgcgtgaaagtctgggatgcggtt
tccatggcgccactggagcagtttaacccccacagcagcagccatcctgtggctcaggcc
tgctggagctccaacaaccagtacctggtgagcgccagcagcagtggggacaaactggtg
ctttccagtctcaagtcggctccggttccagtggtggaactggctgaagggaaaaaacag
acccgtgtttgtctgagttcttcgtctcagtttctggtgagcggcggtctggaccactgc
gtccacatctgggacctgaagaccaagaggctacaccgctccctcaaagaccacaaagag
gaagtaacctgtgtgtccttcaacgctaacgacagctgcatcgcctccggctccaccagc
ggggacctggtcctctacagcctgaccaccaacctgtccagcagagccttcggccacggc
agcaaccagcccatccatgacctcaggctgtccatggtgaagcgctccctcctgggaagc
gtctctgatagcggcacagtggttctctgggactccaacactcagagggagctgcacgtc
ttcgacggcgcccacaaggcccccggctcgggtttggccttctccccgaccagcgacctg
ctggtcgtcagcgtcggcctcgacaagaagatcatctgctacgacacggcaagcaggata
atcctgagggcgatccgcgtggacagtcctctgacctcggtggacttcacactggatggt
accggcctggtggtcgggtccactcaggggaagatctaccagtacgacctgaggaactct
agcgccccgaccaaaatcacagcggctcacagaacctcggtgacatgtctgcgcttccag
agtaacgccagcagacagaagtccagtaaactggcttctgccaagatttcaagcaccaag
agatccagctccaaactgtccagcagccagactgactccgcccccagttcaggccccgcc
cctcacagacaggtcgccagcacagcaggaggcgctgctccagaggtgatgtgtcgtgag
gcggaaggccagccaggggtggagcagttggtggagaagttcggagtcgttggaagaaac
agtctggacatcttctctccccctcgtgaaggtccagaatccaggacccaggcgacgagt
ggagacactccctttggaagatcacatgttacgggttctgagatgctgtccagagacggg
gagggtcagccgctggtggggcgcgccagcctggacatcttctctccggtcagagaagac
tcccactcaggtggcggccaacaacggaagacgcctctggggacccagctgggggcgact
gcaggacggtgctactcgccgctgtccgtgtttcagtccccgctgccaatcaaggaggag
gagccaatggctgcgtccgctgcggagccatgtgacaggaagtctgataagaacagcagc
tccagcctggaggtggagcctcagactccgcccaccacctcccaggagaccaatcagagc
caggcgggtgcgccattttacaccccggaactgggcctccgcaaagccaatggtgttccg
gctcagctcagttatgactcgcctgtctgcagaactccgcccaccgcagcagcaggtacg
gcttcaggctctgctgcgctggcggcggtgtcgtcctcgctgtcccagaacatcgcagat
atggttggacaagacggcgccgctccgctcacctccctgcagatccacttcatccagaac
atgatccacgagacgctggacgagttcaggaccgcctgccaccaggacatcatcaacctg
caggtggaaatgatccggcagttctacattcagctgacggagatccacggtctgattgag
aaatactccgtcaacgagtccctggtggaggagatcgagaagctgcgagaggaaaaccgc
cggctcagagcaaactactga
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