Cyprinodon variegatus (sheepshead minnow): 107091013
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Entry
107091013 CDS
T06110
Name
(RefSeq) nuclear factor 7, brain-like isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107091013
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107091013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
U-box
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_2
Prok-RING_4
zf-Nse
DUF4618
Perilipin
PEHE
PIN_8
UPF0242
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
107091013
NCBI-ProteinID:
XP_015240194
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MASRAEEGLCCPVCQDVFKDPVVLSCSHSFCKECLKNCWREKEVKECPVCKRRSSMINPP
LNLALKNLCETFIQQREQRASEDLCSLHSEKLRLFCLDHQQPVCLVCRDSEKHTEHRFRP
IDEAAQQHKKKLQETLEPLKEKLELRKKVQEEFDQTAEHMKVQARHTERLIKEQFKKLHQ
FLAEEEEARLAALREEEEQKRGMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLHNY
KAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMKDMVSYTPLILDPNTAGSE
LILSEDLTDGNKGEEQNLPDNPERFGSCFSVLSSEGFNSGKHSWDVDVGDSEEWDLGVIK
QSVQRKGAIDSGFLVICFCEDQHIAASPPSPSKVLSLQKKLQRIRVNLDWDRGKLSFSDL
DTNTHIHTFTHTFTDKMFPYFCTANKVKIVPMKISVSKEQL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagagcagaggagggtctctgctgtccggtctgtcaggacgtctttaaggat
ccagttgttctgtcatgtagccacagcttctgtaaggagtgtctgaagaactgctggaga
gagaaagaagtaaaagagtgtccagtttgtaagaggagatcttcaatgattaacccacct
ttaaatctggctctgaagaacctgtgtgagaccttcatacagcagagagagcagagagct
tcagaggatctctgcagtctgcactctgagaaactcagactcttctgtctggaccatcag
cagccagtgtgtcttgtctgcagagattcagaaaaacacacagagcacagattcaggccc
atcgatgaagctgctcagcaacacaagaagaaacttcaggaaactctggaacctttaaag
gagaagctggagctcaggaagaaagttcaagaggagtttgatcagacagcagaacacatg
aaggtccaggcccgacacacagagaggctgattaaggagcagtttaagaagcttcatcag
tttctagcagaggaagaggaggccaggctggctgcactgagggaggaagaggagcagaag
agagggatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgcacaactac
aaggctgcagtggaaagagtccagcgctgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacatctgggcaacctggccttcaacatctggagcaac
atgaaggacatggtgtcctacactcctctcatcctggacccaaacactgctggttcagaa
ctcatcctgtctgaagatctgaccgatgggaataaaggagaggaacagaatcttcctgat
aatccagagaggtttggatcttgcttttctgtcctgagttctgaaggctttaactcaggg
aagcacagctgggatgttgatgttggagacagtgaagaatgggaccttggtgtgataaaa
cagtctgtccagaggaagggagccatagactctggatttttggtgatatgtttctgtgaa
gatcaacacattgcagcatccccaccatctccttccaaagtcctctcacttcagaagaag
ctccagaggatcagagtgaatctggactgggacagaggaaagctgtccttctctgatctg
gacactaacacacacatacacaccttcacacacaccttcactgacaagatgtttccatac
ttctgcactgctaacaaagtaaaaatcgtacccatgaagatctcagtaagcaaagagcag
ctctga
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