Cyprinodon variegatus (sheepshead minnow): 107091611
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Entry
107091611 CDS
T06110
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107091611 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107091611 (exosc5)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107091611 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107091611
NCBI-ProteinID:
XP_015241116
Ensembl:
ENSCVAG00000009396
UniProt:
A0A3Q2DYG1
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MMEVSPSENVSLREFGCEQTLLSRPDGSASFVQGDTSVMAGVYGPAEVKVSKEIYDRATL
EVLVYPKVGLPGVRERSQEQCVRETCEASLLLSLHPRSSLTLILQVLHDAGSLLSCCLNA
ACMALMDAGLSMSCLFCGVTCAISTEGEIITDPTAAQEKESRALMTFAIDSKEHRVMMSS
TRGSFSVQELQQCIAISQKASEKIFQFYRDSVRRRYSKNL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtctctccttctgaaaatgtttctctcagggagttcggttgtgaacagacc
ttactctctcgtccggatggatcggcctcttttgttcaaggcgataccagtgtgatggct
ggagtgtacggacccgctgaggtgaaagtcagcaaagagatctatgacagagcaaccctg
gaggtcctagtttatcctaaagttggacttcctggtgtgagggaacgatcccaggagcag
tgcgtacgcgaaacctgtgaggcatctcttcttttatctcttcatcctcgttcctcgctc
acactcatcctgcaagtgctacacgatgctggatcactcctgtcctgctgtctaaatgca
gcctgcatggccctgatggatgcaggcttgtctatgagttgcttgttttgtggagtgact
tgtgccatcagtacagaaggtgaaatcataacagacccaactgcagctcaggagaaggaa
agtcgagcgttgatgacttttgccatcgacagcaaagaacacagagtaatgatgtcatca
acccgaggctcgttttcagttcaagagctgcagcagtgtatagccattagtcagaaagca
tcggagaagatcttccagttctacagagactcagtgaggcggcggtactccaagaacctc
taa
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integrated database retrieval system
