Cyprinodon variegatus (sheepshead minnow): 107092203
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Entry
107092203 CDS
T06110
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107092203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107092203
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107092203
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107092203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
107092203
NCBI-ProteinID:
XP_015242017
Ensembl:
ENSCVAG00000009574
UniProt:
A0A3Q2CQK0
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MEERLNGSLPVVSPEYLHQWVRSAQQFQALQSQYANFNPQHQFHYPENPTAEAAAAHMAA
PEPAMQQMEPADLTKPPAKKRGRPAQPKEPGAPKPPKVPKAPKQPKPPKDPNAPKAKPGP
KPKKAAEAQGDGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYNLDYVIIGIN
PGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARATPGS
KDLSSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGLQPHKIP
ECDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVRKAAEIEEINYTFDLQLA
KEDAKRLAIKEEQYDPGYEDAYGGAYVEKGAEESQAGSQTNGHCTFTSTANSEGAQMAST
SQTEGQLPDGQWMSQSFADQIPNISGGPKDGSM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggctgaatggatctctgcctgttgtctccccggagtatcttcatcagtgg
gttcggtccgcccagcagtttcaagctctccagtcccagtacgccaacttcaaccctcaa
catcagtttcactacccagagaatccgactgcagaggcagcggcagcacacatggccgcc
ccagaacccgcgatgcagcagatggaacctgctgacctgaccaaacctccagctaaaaaa
agaggtagaccagcccaacccaaggaaccaggtgcaccaaaacccccaaaggtccccaaa
gcaccaaaacaaccaaaaccacctaaggacccgaatgcacctaaagctaaaccaggtcca
aaacccaaaaaggctgctgaagctcagggggatgggaagcaggagaagattgatgagagc
ttcaagaaggtaaagaggaaagtggaccgcttcaaagggatgtcggaggaggaagtcatg
aagaagacactacccgacctgctggattacaacctggattatgtcattattggtataaat
ccaggactgatggcagcttttattggccgatggtttccaggtcctggaaatcatttctgg
aaatgcttgtttctgtccggatttacagaggagcaacttaaccacatgcatgacacaacg
ctgcctgtcaaatacaaaatgggctttaccaatatggtagccagggccacacctgggagc
aaagacctctcaagtaaggaattgcgagaaggaggaaaaattcttgtggagaagttaaag
aagtacaaacccctcatagctgtgttcaatgggaaatgtatctatgaaatgttctgcagg
gaactgtttggcaaaaaaccccagaagctcgagtttggtttacagccgcacaagatccct
gaatgtgacgtggccttgtacctgatgccttcctccagtgctcgttgtgcccagtttcct
cgcgctcaggacaaggttcacttctacatcaaactgagggagctcagagatcagctgaag
ggtgtccgaaaagcagctgagattgaggagatcaactacacgtttgatcttcagttagct
aaggaggacgctaagaggttagcaataaaggaggagcagtatgatcctggatatgaagat
gcctacggtggagcgtatgtagagaaaggagctgaagaaagccaggctgggagccaaacc
aacggtcactgtacgttcacatctactgcaaactcagaaggagcccaaatggcgagcaca
tcccaaacggagggtcagctcccagacggacagtggatgagccagtcgttcgcagatcag
attcctaacataagcggcggaccaaaagatggcagcatgtga
DBGET
integrated database retrieval system
