Cyprinodon variegatus (sheepshead minnow): 107100244
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Entry
107100244 CDS
T06110
Name
(RefSeq) trace amine-associated receptor 1-like
KO
K05051
trace amine associated receptor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107100244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cvg04030
]
107100244
G protein-coupled receptors [BR:
cvg04030
]
Rhodopsin family
Biogenic amine
Trace amine
107100244
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Piezo_RRas_bdg
7tm_4
TRAP_alpha
Motif
Other DBs
NCBI-GeneID:
107100244
NCBI-ProteinID:
XP_015254147
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MEHPGPNAVYLGAISSPCLTAVCVMLYGFITLLSLVTVCGNLLVVIAVIYFKQLHTPTNI
LIVSLAVADLLVGLLVFPFSMFFSLSSCLYNASLFCKIRDSLHILFSLCSILHLCCISLD
RYHAVCQPLTYKSKINGHVVFIMIAVSWGVSVFVAIAVVQTRSTNDDCQDMCFIDVIMAN
IVAPLLSFYVPILIMICIYLKIFVVAQRQVRSIQTRTKPGATVSKMERKATKTLAIVLGV
FLFCWAPFFFFLTFQPLGNNSAPVPVIETVTWFGLSNSTLNPFIYGFFYSWFRSAFKMIV
SGKIIKGDFVNMKLH
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaacatccgggcccaaatgctgtctacctgggagccattagcagcccgtgcctcaca
gctgtatgtgtgatgttatatggtttcataactctattgtctcttgtcaccgtttgtgga
aacctccttgtggtaattgctgtaatttactttaaacaattgcacactcctactaacatc
ctcatagtgtccctggctgtggctgacctgttggttgggctgttagtttttcctttcagc
atgtttttttctcttagttcatgtttgtataatgccagcttattttgtaagataagagac
agccttcatatattgttcagcctatgctctattttgcatctctgctgtatttctctggac
agatatcacgcagtgtgtcagcctctaacatataaatctaaaatcaatggccatgttgtc
ttcattatgattgctgtgagctggggtgtttctgtattcgttgccatcgctgttgtacaa
actagatctaccaatgatgactgtcaggacatgtgctttattgatgttatcatggcaaac
attgttgcacctttactgtcattctatgttcctattctcataatgatttgcatttacctg
aagatatttgttgttgcacagagacaggtacgcagcatccaaaccagaacaaagcctgga
gcaactgtcagtaagatggagagaaaagccaccaaaactctggctattgttttaggagtt
tttctgttttgctgggctcctttcttttttttcttaacttttcaacctttaggaaataat
tcagcaccagttcctgtaattgaaacagtcacatggtttggactgtcaaactctacacta
aatccatttatctatggtttcttttatagctggttcagatcagcctttaaaatgattgta
tcagggaaaattattaaaggagactttgttaacatgaagttgcactaa
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