Cyprinodon variegatus (sheepshead minnow): 107102376
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Entry
107102376 CDS
T06110
Name
(RefSeq) leucine-rich repeat-containing protein 7-like
KO
K24055
leucine-rich repeat-containing protein 7
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107102376
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
107102376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
PDZ
LRR_1
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107102376
NCBI-ProteinID:
XP_015257149
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MPKSIHRLTQLERLDLGSNEFSEMPEVLEQIHSLKELWLDNNSLQSIPGSIGKLRQLRYL
DLAKNRIESLDSDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTALPHTI
GSLRRSQSSPKPKQGLSLLEELDCSCNELESLPPTVGYLHSLRTFAADENFLIELPREIG
NCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQ
SKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAFD
FEDKKEEEDNSGKVEINLKRYPTPYPEDLKNMVKSVQSLVGKGMHPGHGHQHQLSSGSAT
SAGTNMEHTHLSKESYEPPWPLPPKELMQVFDSFDGRNETVCQVTDREMQDFSQSQLMDQ
GSMHNSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDK
KESTDEEVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPSANTHSHAHSHNPGLQAPNKDQ
APQTHWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWSEAQHYDNTG
FDAEESPMDPPSSNTSQGNPPLGSKPRSQSAHGRRPLLRQDRIVGVPLELDTQTLPYHGN
QRSNADNDHQSSGPPSQNPWQNWTRTPSPLEDRTAFPSKLDLTPTSSPNPDRKDIDSRLE
QGSGPLPGSWTYHNSQGEQIRKDQLSVGGGNKVTVVMSKSSDRLSPMMRETRSKFKKSQS
IDEIDIGSYKVYSIPMESYSSSIEQQTSLDRQELPGSMEQTSMSRSQSAPMLDDEMGFPG
HGGSSQNQSGQNQKPTIPHKAYHFDQNYNPQMTIDRRIPPPFPNTPDYVNHSSKAMDYLS
QPGKTLPKELVSPRYRAYPPLEMFSFPQGPINQDGSHSQQQQQQTISTQRSRPGFLRRAD
SLVSSTELALFRRVHEAQQEALQEAQYKQQTDPPHYSRALAYSSPMEHSALTNMSDNQNQ
MMHNKRNGRYDDDYTTYQEQKKPMIGYPTKSLTQRRPLSARSYSTETYGASQARPVSARP
TMAALLEKMPPDYTLATCPEKPSEDTIKVRPGVQPKPEDITSKMPADWRQQLLRHIEAKR
LDRTPSQQAAMLDNDQEEVPGSNQWAPYSLGRRDVPPENLMKKGGHSHNSSHQSHNTMIV
TSTSSSSSTVPHRVVGQQVYDGMMNKGGQYQQGMSLSVVPAGGPGQYQGNVSQALSSSGQ
AYPSSGLPMALSSSGNQSQYNPHSSHQSSMPATNPQYHVNQGMVHSNQSVMASHNNPRPQ
SARCLLQTKGQKSMDGYQEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQH
DGPAASALKPGDKILQANGHSFLHMEHETAVSLLKSFPRTVDLVVLRDSSTR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtccatccacagactgacacagctggagaggctggatctgggtagcaatgaa
ttctctgaaatgccagaggtgctggaacagatacacagccttaaggagctgtggctggat
aacaactctctacagtctatacctgggtcaatagggaagcttcgtcagttgcggtattta
gatttggccaaaaatcgcattgagtctttggacagtgacatctctggctgtgaggcctta
gaagatctactgctatcctccaatatgctgcagcatctgccagactctataggaatgctg
aagaagctgaccactctaaaggtagatgacaaccagctgaccgcactgcctcacactatt
gggagccttcgaaggagccagtccagtccgaagccaaagcaaggcctgtctcttttggag
gagttggactgtagctgtaatgagctggagtcgttacctcccactgttggctacctgcac
agcttgagaacttttgctgcagatgaaaacttcctcatagagctgccacgggagattggt
aactgcaagaatgtgacggtgatgtcacttcggtccaacaagctggagtttctgcctgat
gaaatagggcagatgaccaaactacgtgttcttaacctcagcgacaacaggttgaagaat
ctaccgtttaccttcaccaagctgaaggacttggcagctctgtggctctctgacaatcag
tccaaagctttgatcccactgcagacagaagctcatccagaaaccaaacagaaggttttg
accaactacatgtttccacaacagcccagacatgatgaagattatcagtcagatagcgac
agctttaatccgacactgtgggaagaacaaagacagcagagaatgaccgttgcctttgac
tttgaggacaaaaaagaagaggaagacaactctgggaaggtggaaataaacttaaagcgc
tacccaaccccataccccgaagatctgaaaaacatggtcaaatcagtgcagagtcttgtg
ggtaaaggcatgcaccctggacatgggcaccagcatcagctgagctcaggcagcgccacc
tcagcaggaaccaacatggaacatacgcacctcagcaaagaatcatatgagccaccatgg
cccctgcctcctaaagagttgatgcaggtatttgattcatttgatggacgaaatgaaact
gtttgccaggtgactgacagagagatgcaggacttctctcagtctcagttaatggatcaa
ggatcaatgcataactctggcattgacattcccaagaggaaggacaaagaggacttgaca
gagagctctgaggactcaatgggtggttctccgaacgatatccgtatctcagatatgagg
ccaactctggtggagccaccaatgtacaaaccaaaggtggtactgctggggaaggataaa
aaagagtcaacagatgaggaggtggataaactccactgtctgaaccacagtggttcctca
gccacctactctgactactccccctcccagggctcctcaggctcctccaatccttccgcc
aacacacactctcatgcacactcacacaatcctggcctgcaggccccaaataaagaccaa
gcccctcaaacacattggaccaacagacttgcccagtcatttccaaagcctattgactcc
aaacccctactgtctcagagagaaactcctccatcaggaaccctgcagcaacggggagat
cggcgtccgctcagcgagccttttgattggtctgaggctcaacactatgataacacaggt
tttgatgctgaggaatctcctatggaccctccatcctctaatacaagtcagggtaaccct
cctctgggctccaaaccccgcagtcagtcagcacatggccgccggccgcttctcaggcaa
gatcggattgtaggagtccctttggagctggatacccagacactcccctaccacggtaac
caacgttcaaatgcggataatgaccatcagtcctctggacctccctcccagaacccctgg
cagaactggaccagaactcccagccctttggaggacagaaccgctttcccctcgaagctg
gacctgacacccacctcaagccccaaccctgatcgtaaagacattgactcaagactggaa
caaggctcaggacctctgcctggaagctggacatatcacaacagtcagggggagcagatc
aggaaggatcagctcagtgttggtggaggaaacaaagtaacagtggtgatgagtaaaagc
tcagaccgactctctccaatgatgagggagacgagatccaagtttaagaagtcccagagt
atagatgagattgacattggctcctacaaagtctacagtattcctatggaaagctacagt
tcatccattgaacagcagactagtttggaccgtcaagagctccctggttccatggagcag
accagcatgtcaaggtcacagtctgcacccatgttagacgatgagatgggcttcccagga
catggaggtagcagccagaatcagtctggacaaaatcagaaacctaccattcctcacaag
gcctatcactttgaccaaaactacaacccccagatgaccatagatcgcagaatccctccc
cccttccctaacacaccagattatgttaaccactcatcaaaggccatggattacttgagt
cagcctgggaagacactacccaaggagcttgtgagtcctcgttatcgtgcgtatccacca
ctggagatgttttcattcccccaaggcccaatcaaccaggacggttcccacagccagcag
cagcagcagcaaactatctcaactcagcgctccaggccaggctttttgaggagagctgat
tctttggtaagctctacagagcttgccttatttcgtagagttcatgaagcccagcaggag
gcgctacaagaagctcagtacaagcagcagacggacccccctcattatagtcgggctctt
gcctattcctcccccatggaacactctgccctgaccaacatgtctgacaaccaaaaccaa
atgatgcacaacaagagaaacggtcgctatgatgatgactataccacataccaggagcag
aagaagcccatgattggttatccgaccaaaagtctgactcagcgtcgccccctgtcagct
aggagctacagtactgaaacctatggagcatctcaggcccgtccggtgtcagctcgtcca
accatggctgctttgctggagaagatgccacccgactacactttggcaacatgtcctgag
aaaccgtctgaggacaccatcaaagttagacctggtgtgcagccgaaaccagaggacatc
acttcaaagatgccagctgactggaggcaacaacttcttaggcacatagaggccaaacga
ttggacaggacaccttcccagcaggctgcaatgctggataatgaccaggaggaggtccca
gggagcaaccagtgggctccctactctcttggtcgaagagacgttcctccagagaacctc
atgaaaaagggtggacattcacacaactcctcacatcagtcacacaacaccatgatcgtc
acctccacctcttcctcctcgtccactgtgccgcatcgtgtcgttgggcagcaggtttat
gatgggatgatgaacaagggtgggcaataccagcaaggaatgtccctgtcagtagtacct
gctggtggccctgggcagtaccaaggcaatgtttcacaggctctttcttcctctggccag
gcttatccgagtagtggcctgcccatggccctgtcatcgtctggaaaccaatctcaatac
aaccctcactcctcccatcagtcctccatgcctgcaaccaatccacagtatcatgtcaat
caaggcatggtccacagcaaccagtccgtcatggcttcccacaacaacccgagacctcag
agtgctcgatgtctgctacaaactaaaggccagaaaagcatggatggttaccaagagcag
ttgtgtgtgagaatagagaagaaccccggccttggcttcagtatctctggtggcatcagt
ggccaggggaaccccttcaaaccctccgacatgggtatctttgttactagggtacagcat
gacgggcctgctgcctccgcactgaagcctggagacaagatactacaggctaatggacat
agttttttacacatggagcacgagacagccgtctccctgctgaagagtttccctcggaca
gtggacttggtggttctgagagacagcagcacgcggtag
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integrated database retrieval system
