Crassostrea virginica (eastern oyster): 111103361
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Entry
111103361 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111103361
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111103361
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
Anemone_cytotox
LRRNT
Motif
Other DBs
NCBI-GeneID:
111103361
NCBI-ProteinID:
XP_022292287
EnsemblRapid:
LOC111103361
UniProt:
A0A8B8AL66
LinkDB
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Position
7:38753218..38755541
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AA seq
704 aa
AA seq
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MDCKWTHVNFDVIVNCSWRGLRSIPRLNDSVTNLDLSHNEITHISRTSLPKHLKFLDFSW
NKFKALTGSPFVLLTKLRFLDISHCKLRDVDKGVFGELYNLQYLNISYNRELGFESLPNI
TFNLNQTKIASLDLNGINCATGIGTIIKRTHLKNIQMTRLKKLSLASNRLELFETGVISN
LPGTLQILSTAENKLAAGAYLLEFPSMPEMKVYNMSFQLPPPKYPDSVLNQCEEKLDENV
KSHDVSKRSTNFEFNWSLPLPPKLEILYAQSSKLFVKDPTLLVYAPNLRHVYLQNNFLLS
LKRPIHATNNRIETLDLSNNFCSHFCRTNDGQYVKHLNLSHNDLGQDFEKDTDGTICKTF
TSLQVLDISFNEIISLPKLFLKNSNNLKYINASGNRLSSWIVDIENMSNLTFLDLSENKL
ATLSADTRSQFERAFQRSNLTINLSENGLACTCENQDFMYWIQKNQYHFRNIENYFCLTK
DITFHFKTLESSIDKLRTQCASYLFLYIGSAVLLAVIFSLFIGFILVKNRWKIRYIIYKT
KQRFDQKAHYKQISTNVNYEYDAFISYSELQRMFVVDKILPNLEDDRSLKLWIKDRDCNI
GIGLMENIMNGIHESKHTICIISKEYLESSWGDYELNMAKLEGIEDRGNLNYVILILLPE
VYEAMHVFPNKIKDLIDKECYIEYPNEPCGCDDFWDRLAKKIEN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaaatggacacatgtcaatttcgatgtgattgttaactgttcttggagaggt
ctgaggtctattccccgactcaatgactctgtcactaaccttgacttaagtcacaatgag
attacccatatatctcgaacatccctaccaaaacatcttaagtttctcgacttctcatgg
aataaattcaaagctctcactggatcgccttttgtcctcttgacaaagttacgtttcctt
gacatatcgcattgtaaattacgtgacgtagacaaaggagtgtttggtgagttgtataac
ctacaatacttaaacatatcatataacagagaattgggatttgaatcgttgcctaatata
acgtttaatctaaaccagactaaaatagcatcactggatttaaatggaatcaactgtgcc
acgggaattggaaccatcataaagcgtacacatctgaagaacattcaaatgaccagattg
aaaaaactctccctagcaagcaacagactggagctctttgaaacaggtgtgatttcaaat
ttacctggaacattacaaatactttcgacagctgaaaataagttagcagcaggtgcatac
cttctcgagtttccatcaatgcccgagatgaaagtatacaatatgagttttcaacttcct
cccccaaaatatccggattcagtcttaaatcaatgtgaggaaaaattggatgaaaatgtc
aaaagtcatgacgtatccaagagatctacgaacttcgaatttaattggagtttgccgctt
ccaccaaaattggaaatcttgtatgcacaatccagtaaactattcgtcaaagacccaact
ttgttagtttatgcaccaaatctgcggcatgtatacttacaaaacaacttcctactgtct
ctgaagagaccgattcacgcgacaaataatcgtatcgaaactttagacctctcgaataat
ttctgttctcatttttgtcgtacaaatgatggacaatatgtcaagcacctcaacctttcc
cataatgacttgggccaagattttgagaaagatactgatggtacaatttgtaaaacattt
acaagtctacaagttttagacatatcttttaatgaaataatttcgctccctaaactcttc
ctgaagaactctaataacttgaagtacataaatgcaagtggcaaccgattgtcctcctgg
attgtagacattgagaacatgtctaatctaacgtttttagatttgtcggaaaacaaatta
gctacgttaagcgcagatacacgctcgcaattcgaaagggcattccaacgatccaacttg
actatcaatttgtcggaaaacggattggcctgtacatgtgaaaatcaagactttatgtac
tggattcagaaaaaccaatatcattttcggaacattgagaattatttctgtttaacaaaa
gatataacatttcatttcaaaaccctagaatcctctattgacaaactacggacgcagtgt
gcatcgtatttgttcttgtacataggaagtgcagtattattagcagttatttttagttta
ttcatcggcttcatactcgttaaaaacagatggaaaatccgatatataatttacaagact
aaacaaaggttcgatcaaaaggcacattacaagcagatctcaactaatgtcaattatgaa
tatgatgcctttatatcttatagtgaacttcagaggatgtttgttgtagacaaaatccta
ccgaatttggaggatgaccggagtctgaaactttggattaaagaccgagattgtaatatt
ggaattggtctaatggaaaatataatgaatggaatacatgaaagcaagcatacaatttgc
attatatccaaggagtatcttgagtcttcttggggagattacgaactaaacatggctaag
ttggaaggcattgaagatcgaggaaacttgaattatgtcatactgatattgttaccggaa
gtgtatgaagctatgcatgtattcccgaataaaatcaaggatcttattgataaagaatgc
tacattgagtatccaaatgaaccttgcggatgtgacgatttttgggatcgtttggctaaa
aagattgagaattga
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