KEGG   Crassostrea virginica (eastern oyster): 111110223
Entry
111110223         CDS       T09197                                 
Name
(RefSeq) toll-like receptor 13 isoform X1
Organism
cvn  Crassostrea virginica (eastern oyster)
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_5 LRR_1 CSTF_C
Other DBs
NCBI-GeneID: 111110223
NCBI-ProteinID: XP_022302331
EnsemblRapid: LOC111110223
UniProt: A0A8B8BH97
LinkDB
Position
8:complement(70687673..70695429)
AA seq 752 aa
MDVLSFLVHTLGILVVLDISVNGCTYDHKCNCSLVNGTWYADCSDRELVKSPRFWPNVTR
INLSKNKLSSLPERSLLPDILTHFDLSNNKIVTFRNNAFQQLWKLTDLRLDRNALRVTND
LNSSIFEDLLNIKYLDLSNNPELTLRIMPILTRGIQNSTIEILRLNRIQCTFGVGAELMI
EDLRFLKYTNLKEIYISSNRIEQVENGATYFLPQSLEKISIADNLFTFGMYIFEIISVQN
LKWLNMSLQQMPHSPVEVVENILHFCVNKRRNIISDMEVYPSDETIKHAQEMYKAMSTYN
FTIPVPPNLEIIYAEEMGLRYVIPKLKFSQNTVKELYMQGNTFYRWTGPIIGINHLRLLN
LSNNFCSNVSRDFFSHIINLSELYISNNLLGFSIASDIDGRIFENLLNLRHMDLKANRIA
HLPFMVFKSLKNLQHLDLSNNLLTTVEFDILKLKALKYLDLSGNQIQAFAESTRNNISLL
KEQTNISLNLLNNPLRCDCKTLDFLQWMVKERKLGKIRFPHFRDYACTKSSSDRKVMKFT
NIEIQIEELIKQCSSYTTLVFIIASLIILFLAVLSAGLIYRVRWKLRYFYYMTKSRYHGY
KAVRGDDQSDFKYDAFVSYADEDRQFVLKMISKLEGEKNIRLCIHHRDFVPGYDIAENII
TAVNKSKKTIIILSPNYIKSSWCMYELHIAKMEEIYSREKENVLFLIFYEAVPADIIPLK
IMDVINQKSYIEFPNDEYGNTVFWNRLGEALM
NT seq 2259 nt   +upstreamnt  +downstreamnt
atggatgtgctatccttccttgtgcatactttaggaatcctggttgttctggatatcagc
gtaaatggttgtacgtatgaccataaatgcaattgttctttggtgaatggaacatggtac
gcagactgctccgatcgagagttggtaaagtcgcccaggttttggccaaatgtgacaaga
atcaacctaagtaagaataaattgagtagccttccagaaagatcactcttacctgatatt
ttaacccacttcgatctttccaacaataaaatagtcacgttcagaaacaatgcttttcaa
caactttggaaactcacagatttaagacttgatagaaatgcacttcgtgtaactaacgac
ttaaatagcagcatttttgaagacctcctcaacatcaaatatttggacttgtcgaataac
ccagaacttaccttaaggataatgcctatattaacacgcggtattcaaaattccaccata
gagattcttcgactcaatagaattcagtgtacatttggtgtaggtgcagaactcatgata
gaagatttgagatttttaaaatatacaaatctaaaagaaatttacatttcaagcaataga
attgaacaagtcgaaaatggcgcgacttattttttgccacaaagtctggaaaaaatttca
attgcggacaacctttttacgtttggaatgtatatttttgaaataatctccgtacaaaat
ctaaaatggctaaacatgtcattacaacaaatgccacacagcccagtagaagtcgttgaa
aatattttacatttctgtgtgaataaaagaagaaatatcatatccgacatggaagtatat
ccatctgatgaaactatcaaacatgcacaagagatgtataaagcaatgtcgacgtataat
tttacgatacctgttccaccgaatttagaaataatatatgctgaggaaatggggctacgc
tatgttattccaaaacttaaattctcccaaaacacagttaaagagttgtacatgcagggg
aatacattttatcggtggacaggcccaatcattggtataaatcatcttcgtttactaaat
ttgtcaaataacttttgttctaatgtatcgagagatttcttttcacatatcataaatctt
tctgaattatatatcagcaacaatttgctaggctttagcatcgcatcagatatagatggt
agaatctttgaaaatctactcaatttaagacacatggatttgaaagctaatagaatagca
catttgccatttatggtatttaaaagcttgaaaaatctacaacacttagatcttagtaac
aatttgctaacaacagttgaatttgacatattgaagctaaaagctctaaagtatcttgat
ttatcaggaaatcagatacaagctttcgctgagtcaacaaggaacaatatatctcttctc
aaagagcaaaccaacatcagcctaaacttactgaacaaccctttacggtgcgattgcaaa
actctcgactttttgcaatggatggttaaagaaagaaaattggggaagatcagatttcca
catttccgagactacgcttgcactaaatcttcttcagatagaaaagtaatgaagtttact
aatatcgagatacaaatcgaagaactaattaaacaatgcagctcctatactactctggtt
ttcatcattgcatcgttaatcatactttttctcgcggttctctcggctggtctgatctac
cgagttagatggaaacttcgttacttttactacatgacaaaaagtcgctatcatggatat
aaagctgttcgaggggatgaccagtcagacttcaaatatgatgctttcgtttcctatgct
gatgaagatagacaattcgttctaaaaatgatctctaagttagaaggagagaaaaatatc
cgtttgtgtatccaccatcgcgattttgttcctggttacgacattgctgagaacatcata
acggctgtcaacaaaagcaagaagacaattattattttgtctccaaactacatcaagtca
agttggtgtatgtatgaattacatatcgcaaaaatggaagagatctattcgcgagagaag
gaaaatgttttgtttcttatattttatgaagcagttcctgctgatataattcctttgaaa
ataatggatgtgatcaaccaaaagtcatacatagagtttcctaatgatgaatatggtaat
actgttttctggaatcgactgggagaagccctgatgtaa

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