Crassostrea virginica (eastern oyster): 111110223
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Entry
111110223 CDS
T09197
Name
(RefSeq) toll-like receptor 13 isoform X1
Organism
cvn
Crassostrea virginica (eastern oyster)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_1
CSTF_C
Motif
Other DBs
NCBI-GeneID:
111110223
NCBI-ProteinID:
XP_022302331
EnsemblRapid:
LOC111110223
UniProt:
A0A8B8BH97
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Position
8:complement(70687673..70695429)
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AA seq
752 aa
AA seq
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MDVLSFLVHTLGILVVLDISVNGCTYDHKCNCSLVNGTWYADCSDRELVKSPRFWPNVTR
INLSKNKLSSLPERSLLPDILTHFDLSNNKIVTFRNNAFQQLWKLTDLRLDRNALRVTND
LNSSIFEDLLNIKYLDLSNNPELTLRIMPILTRGIQNSTIEILRLNRIQCTFGVGAELMI
EDLRFLKYTNLKEIYISSNRIEQVENGATYFLPQSLEKISIADNLFTFGMYIFEIISVQN
LKWLNMSLQQMPHSPVEVVENILHFCVNKRRNIISDMEVYPSDETIKHAQEMYKAMSTYN
FTIPVPPNLEIIYAEEMGLRYVIPKLKFSQNTVKELYMQGNTFYRWTGPIIGINHLRLLN
LSNNFCSNVSRDFFSHIINLSELYISNNLLGFSIASDIDGRIFENLLNLRHMDLKANRIA
HLPFMVFKSLKNLQHLDLSNNLLTTVEFDILKLKALKYLDLSGNQIQAFAESTRNNISLL
KEQTNISLNLLNNPLRCDCKTLDFLQWMVKERKLGKIRFPHFRDYACTKSSSDRKVMKFT
NIEIQIEELIKQCSSYTTLVFIIASLIILFLAVLSAGLIYRVRWKLRYFYYMTKSRYHGY
KAVRGDDQSDFKYDAFVSYADEDRQFVLKMISKLEGEKNIRLCIHHRDFVPGYDIAENII
TAVNKSKKTIIILSPNYIKSSWCMYELHIAKMEEIYSREKENVLFLIFYEAVPADIIPLK
IMDVINQKSYIEFPNDEYGNTVFWNRLGEALM
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctatccttccttgtgcatactttaggaatcctggttgttctggatatcagc
gtaaatggttgtacgtatgaccataaatgcaattgttctttggtgaatggaacatggtac
gcagactgctccgatcgagagttggtaaagtcgcccaggttttggccaaatgtgacaaga
atcaacctaagtaagaataaattgagtagccttccagaaagatcactcttacctgatatt
ttaacccacttcgatctttccaacaataaaatagtcacgttcagaaacaatgcttttcaa
caactttggaaactcacagatttaagacttgatagaaatgcacttcgtgtaactaacgac
ttaaatagcagcatttttgaagacctcctcaacatcaaatatttggacttgtcgaataac
ccagaacttaccttaaggataatgcctatattaacacgcggtattcaaaattccaccata
gagattcttcgactcaatagaattcagtgtacatttggtgtaggtgcagaactcatgata
gaagatttgagatttttaaaatatacaaatctaaaagaaatttacatttcaagcaataga
attgaacaagtcgaaaatggcgcgacttattttttgccacaaagtctggaaaaaatttca
attgcggacaacctttttacgtttggaatgtatatttttgaaataatctccgtacaaaat
ctaaaatggctaaacatgtcattacaacaaatgccacacagcccagtagaagtcgttgaa
aatattttacatttctgtgtgaataaaagaagaaatatcatatccgacatggaagtatat
ccatctgatgaaactatcaaacatgcacaagagatgtataaagcaatgtcgacgtataat
tttacgatacctgttccaccgaatttagaaataatatatgctgaggaaatggggctacgc
tatgttattccaaaacttaaattctcccaaaacacagttaaagagttgtacatgcagggg
aatacattttatcggtggacaggcccaatcattggtataaatcatcttcgtttactaaat
ttgtcaaataacttttgttctaatgtatcgagagatttcttttcacatatcataaatctt
tctgaattatatatcagcaacaatttgctaggctttagcatcgcatcagatatagatggt
agaatctttgaaaatctactcaatttaagacacatggatttgaaagctaatagaatagca
catttgccatttatggtatttaaaagcttgaaaaatctacaacacttagatcttagtaac
aatttgctaacaacagttgaatttgacatattgaagctaaaagctctaaagtatcttgat
ttatcaggaaatcagatacaagctttcgctgagtcaacaaggaacaatatatctcttctc
aaagagcaaaccaacatcagcctaaacttactgaacaaccctttacggtgcgattgcaaa
actctcgactttttgcaatggatggttaaagaaagaaaattggggaagatcagatttcca
catttccgagactacgcttgcactaaatcttcttcagatagaaaagtaatgaagtttact
aatatcgagatacaaatcgaagaactaattaaacaatgcagctcctatactactctggtt
ttcatcattgcatcgttaatcatactttttctcgcggttctctcggctggtctgatctac
cgagttagatggaaacttcgttacttttactacatgacaaaaagtcgctatcatggatat
aaagctgttcgaggggatgaccagtcagacttcaaatatgatgctttcgtttcctatgct
gatgaagatagacaattcgttctaaaaatgatctctaagttagaaggagagaaaaatatc
cgtttgtgtatccaccatcgcgattttgttcctggttacgacattgctgagaacatcata
acggctgtcaacaaaagcaagaagacaattattattttgtctccaaactacatcaagtca
agttggtgtatgtatgaattacatatcgcaaaaatggaagagatctattcgcgagagaag
gaaaatgttttgtttcttatattttatgaagcagttcctgctgatataattcctttgaaa
ataatggatgtgatcaaccaaaagtcatacatagagtttcctaatgatgaatatggtaat
actgttttctggaatcgactgggagaagccctgatgtaa
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