Crassostrea virginica (eastern oyster): 111112743
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Entry
111112743 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: telomere-associated protein RIF1-like
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
111112743
NCBI-ProteinID:
XP_022306200
EnsemblRapid:
LOC111112743
UniProt:
A0A8B8BSD0
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All DBs
Position
9:70746053..70768185
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AA seq
2578 aa
AA seq
DB search
MGEDINVSTLLQTLNSESASQEEKDSVFLQLANHLKDDSLSLVGLDVSKHSRQLCDFVGA
DLKKNRADSNGLQVLGFCLHDSEAVRNLSSGFSSQVLTSLCECIEKSEDKNVCAKSLWCL
HQQSIGKNIVSQQVDAMLKAVEHALLKWKMQSSIVEHEASLVIYRLLKDYRREMEGCILR
WGKLLLPLMAHKATKINEKALEVVKLELPTLLQHQKELAQALIPEFKLRISSEMKSFFTS
QQELHALECWEIYVQICGQELHHGSFINMLLPIMELAFKSSNEVKVHAFQAWQVLIDNFA
TNYEILTCPKRIKLIMQVLKITTAKTEAVAMAKLQVWWHFVWLLGPKASTYFEQVCLPLL
QFCVGGLKGSGGLGTPRANQNGPSPRMNLSGSSIGSTYPRIPSLQLKGCEVLAHFLGSVX
QELDIPKFSFSLDCLTHDLISGPXFFVKHSSVFVQCAADLICXLGSRIPEELLLHIWFSL
IAHMRNGLESGSRSEMKDAFTLFLTQFQILVLSQALTPKIILKLFNAVCCYPVKXLISTA
YTVNCGEKLHGTPALFLVQLLLTPSLIKECSSIESYNALYSKLVNIGATGPGALEFAEAV
LHLLDVSAVFMDSSELLWRLWSTVVNPLHEFILKTNEVNQGDALEHNFSCLYAALLFPIK
QHLPNKMAVMTVKTLQKTWCEIYQTFARLSALVTNAEANICCEDLCHQINKSLKDTDSMS
FTMLDFLIQACQTMSEAFDFSSLNSGSAFGLNGISVSPAKWTKRKHRPMENLQSMVVLLR
QLLDSLNAYIKGDENKDTTNSVSLQGPANGMIDCLCHLFTHITSSSVLCAVIGHLSQPMG
SLFQESIKKTCAKLFNNAFMQKLEKLWNEISTSLQNKYSGTYDSDFLSKLSPILEATFLH
SRRAIKNQSCQLWSATFGKSSHLIYPDNLRPVLTKVKEKSTIPLPGWISVPVSVVEETPV
SQLSQADSQAPEPHLPGMPSPRKIHGSFLHKAVSPSTKKSPARPTEKINRSPVAVRKNLV
IGELQKEDFVVIKTPPRKRRILTEHQKEVLKEKRDLPTMYNTLDQSQDVSNMFPSDSQFG
SDTQSEPPTPNTDSLIVLDSSLPQSLSQKKDKLXREEQQKIVIRGQRQEDTQNAKRDTGT
GRRRRSVRFKDTMEDKTSKGGKRTNRRGQGVREGTQRAPRRKNQESGEKMAGHEEFEAVW
DQXLSEMVDEVEKSNIEHFVVIKDTISSSQEQKQSSGESTGNTTGSEVILSNGSSNISEL
GKGSSSNEAEDQSSRMNGSSIGSSEKETGSSSKLSSSSTGEVMAAPQNVMEAVEMECLTS
KSSSSSDRLEKSEEGGEKESSQLLLTWTSQLKDLKQTSPGKVQSPLKKLSQERSPARATR
RFASPAKRGRGKTLENSSRGSQKLDEWLIKSPEKVFQVGVISSQSSSTDSSSVDQLPEVT
VVEETQSPKAMRSEISPNSQPIQETPPPPANKETVVFGSNKGSTRKLFSKGTEEKGSLDI
CEDSNIIPASPESKGSSLSIRVGTPVLKLKRLTEEEINHFSPRKGEVGFGTPRQDKMSQE
KEGSVQDRSHEHDDFSDVLPLDEVPVSSSQGFDAQDKTQTSAGEEGVKMTSTENLFTPNE
SRISSQESAAYDPNLLSTFKSNCEGKEVLGTENLKLSQQSDTEMSEEKTVASGEKSLKEV
KLQESGQMYDPKLESTLAQDTPRRGRKRKQETPKKLSPESSRPKRNRQGKGECVKTPRGK
SXGNKRGKQKESIQEKPLEKKDQKNIVKASESEVSRKHDSEENLTLKESEVIQSQSTGNP
TTEMENSCNIDTQEDAGKENCSVCVERQFDSEGXFLESSQGQNLGRPDKKVEEKSKSQKN
ETSKEITAEEKGEKTPSSRVTGEIPPRKSTTKKKIEVAKKRSQKKGKKESESKTSCMSDS
SEDDVPLSQSTKKAVKSKGNLEDKMNEVTERENNSKTDVETAKSESSDDNIPLSKICNKD
XKRMEVDVTVNDQNYPEVKENQARNNQEDNEKEAPGKDENKXKRIVKKKFAPAKTSPLSN
RLRSSQGTLRSGKPTRRSLSPRGSPKSLSLKKTVKRKSLDPNMLTTVVEVLEEQAGKPVK
ETEELEKAVSAEDYVYKEKKEQKXQTAEDISDMLNGAKKVSFGETPTKXGDGTEEGAFAL
FERNTDSKLVVVPRKFXKRVVARRSILKPSSPGSSLYKGSPLRKAVPFHPIKLGQIFAPS
ASPSASILKRRRLSGDLPASSPSPPSKKKKRRVSFADPVTCTGTPLAEAASSPKSLATSI
NSDPSSKSCLFMDVSGAGQNDSEAGQTQDSPVASSLGSYVSVTESQLSVEEAVYPELVDC
SQTVDKVLPQLTTSMWSRGLGQLVKARNINTIGDLSRLSEREIDNLPIRSPKVSTVRKVL
KTFKTQQENQKIKSSKAEDSKSKLDEQASKQVLVGAAEHVPGQGDEIELLPAMEEEMGKL
SPIKKNANEDLNRSIADEMVSSEDLLEKENQWXSDEGECSIGFTPSSTSVEEQEQQQPSQ
VEKNAVIENLEKATSSLSVESLASMKTNELFEAHQKLLSMANAVATXMKRRCSSPDKS
NT seq
7737 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggacatcaatgtctccacacttctacaaaccctgaactcggaatcagcctca
caggaagagaaggattctgtctttttacagttagccaaccaccttaaagatgacagtttg
agtctggtaggcctagatgtctctaaacactcccgacagttgtgtgattttgtcggggca
gacctgaagaaaaacagagctgattccaatggattacaggttcttggcttctgtcttcat
gactcagaagctgtgagaaacttgtcttcaggcttcagtagccaagttttaacctctctc
tgtgagtgcatagaaaaatctgaggacaaaaatgtgtgtgccaaatccctttggtgcctt
caccagcaaagcattgggaaaaacattgtcagccaacaggtggacgccatgctgaaagct
gtagaacatgctctgctgaagtggaagatgcagtcctctatagtggaacacgaagcctct
cttgtcatttacagactgttgaaggactaccggagagaaatggagggatgcattcttcgt
tggggaaagttgttactgcccttgatggcccacaaggccaccaagatcaatgaaaaagca
ctggaggttgtcaagttggagttacctaccttgcttcaacaccagaaggagctggcacag
gctctgattcctgaatttaaactgagaattagttccgagatgaaatcatttttcacaagt
caacaagaattgcacgctctggaatgctgggaaatatatgttcagatttgtggacaggaa
ttgcatcatggaagctttatcaatatgctgttaccaataatggagttggcctttaagagt
tcaaatgaggtcaaagttcatgcatttcaagcgtggcaagtcctgattgacaactttgcc
actaactatgaaattctgacttgtcccaagcggattaaactgatcatgcaggtgcttaag
atcaccacagccaagacggaggctgtggccatggccaagctccaggtctggtggcacttc
gtctggctactggggccaaaggcttcaacctattttgaacaggtgtgcctgcctcttttg
cagttttgtgtgggaggactcaagggcagtggtggactgggaactcccagagccaatcaa
aatggaccaagtcccaggatgaacctcagtggaagttcaattggttcaacatatcccaga
atcccaagcctgcagcttaagggctgtgaagtgcttgcacatttcctaggcagcgtanct
caggagttagatataccaaagttttccttttctttagattgcctgacccatgatctgatc
tctggacctngcttctttgtcaaacattccagtgtatttgtgcaatgtgctgctgatctc
atctgtngactgggctcaaggattcctgaggaattactacttcatatctggttctctttg
attgcacacatgaggaatggcctagaaagtggctcaaggtcagagatgaaggacgctttc
acactcttcctgacccagtttcagatcctggtccttagccaagcactgacacccaaaatc
atactgaaactgtttaatgctgtttgctgctacccagtaaagnncttgatatccactgca
tacactgtcaactgtggggagaaactacatggcactccagctttgttcctagtgcagtta
ttgctgacgccaagcttgatcaaggagtgttcatctatagaaagctacaatgccttgtac
agtaagctggtcaacattggagccactggcccgggggcgctggagtttgcggaggccgtg
cttcacctgctggatgtcagcgctgtgttcatggacagctcggaactgttgtggagacta
tggagtacagtagtcaacccgctgcatgaattcatcctgaagaccaatgaagttaaccag
ggagatgctcttgaacacaacttcagctgtctgtatgctgctctcctgttcccaattaaa
cagcacctgcccaacaaaatggctgtgatgactgtaaagactctacaaaagacatggtgt
gagatctaccaaacgtttgccagattatctgctcttgttaccaatgctgaagccaacatc
tgttgtgaagatctctgtcaccagattaacaagagtctcaaggacacagattcaatgagc
ttcaccatgctagatttcctcatacaagcctgtcagaccatgagtgaagcctttgacttt
tcatctttaaattcaggcagtgcctttggcctcaatggtatcagtgttagtcctgctaaa
tggacaaagaggaagcacagacccatggagaacctccagtcaatggtggtattgttaagg
cagctgctggattcactgaatgcttatatcaaaggggatgaaaacaaggatacaaccaat
tctgtctcccttcagggaccagccaatggaatgattgattgcttgtgtcatctatttaca
catatcacgtcatccagtgtattatgtgctgtgattggtcacttgtcacaaccaatggga
tcattgtttcaagaatctatcaaaaagacgtgtgccaaattgtttaataatgcatttatg
cagaagttggaaaagctatggaatgaaatatcaacatccctccagaacaaatattcgggg
acatacgattcagatttcctgtccaagttatcacccatactagaagccacgttccttcac
tctcgcagagccattaagaaccagtcctgtcagctgtggagtgctacatttggcaagtct
tcacacctcatctaccccgacaatctcaggccagtgctcaccaaggtgaaggagaaatct
acgatccccctacctggctggatttccgtgcctgtctcagtggtggaagaaacacctgtc
agtcaacttagtcaggcggactctcaggctccggagcctcacttaccagggatgccctct
cccagaaaaatccacggcagcttcctccacaaagccgtgtctcccagcaccaagaaatca
cctgcccgccccaccgagaaaatcaaccggtcacccgttgctgtccgcaaaaatctggtc
atcggtgaactgcagaaagaggattttgttgtgatcaaaacacctcccagaaagagaaga
atactaacagaacatcagaaggaagtcctcaaagagaagagagacctgcccaccatgtac
aacacactggaccagtcccaggacgtgtccaacatgttcccgtctgactcccagtttggc
tccgacacacagtccgagccacctacaccgaacaccgactctctcattgtcctggactcc
agtctgccacaaagtctctcacagaaaaaagataaactatgacgggaagaacagcagaaa
atcgtcatcagaggccagcgacaggaagatacccagaatgcaaagcgggacacaggaact
ggaaggaggcgaaggtcagtccggttcaaggacaccatggaggataagacatccaaggga
gggaagaggaccaacagaaggggtcagggggtcagggaggggacacaaagagcccccagg
aggaaaaaccaggaatcaggggagaagatggcgggtcacgaagagtttgaggcagtttgg
gaccaancattatccgagatggtggatgaggttgagaagagcaatatagaacatttcgtg
gtcatcaaggataccatcagcagctcccaggagcagaagcaatcatctggagaaagtact
gggaacacaacaggctctgaagtgattctgtccaatggtagctccaatatctcagaacta
ggtaaaggttcatcatcaaatgaggcagaagaccaatcttccagaatgaatggcagcagc
attggaagtagtgagaaggaaacaggatcttcctccaaattatcatccagctcaacagga
gaggtgatggctgctccccaaaatgtgatggaggctgtggagatggagtgtctcacctcg
aagtcctcgtcctcctctgacagattggagaagtcagaggaaggcggagagaaggaatct
tctcagctgcttctgacatggacaagtcagttaaaagatctgaagcagacgtcacctgga
aaggtacagtccccactgaagaagctaagccaggagagatctcctgcccgggcaaccaga
cgcttcgcatcccctgctaaaaggggaaggggtaaaaccttagaaaattcaagcagggga
tcacagaaactggatgaatggttgatcaaatctccagagaaggtcttccaagtgggtgta
atatcctcacagagttcttccacagattcatccagtgttgatcagcttccagaggtgacg
gtagtggaagagacccaatcaccaaaggccatgaggtcagaaatctctcctaattcacaa
ccaattcaagaaaccccaccacctcctgcaaataaagagactgttgtgtttggaagtaac
aaaggcagcaccaggaaactgttctccaaagggacagaggagaaaggtagcctagacatt
tgtgaagactccaatatcattcctgcctcccccgaatccaagggcagctctctttctatc
agggtggggacacccgtgttgaaactgaagaggctcactgaggaggaaattaatcacttt
agccccaggaagggagaggtgggctttggtaccccacgacaagacaaaatgtcacaagag
aaggagggttccgttcaggaccgcagtcatgagcatgatgatttttctgatgtattgcct
ttagatgaagtgccagtatcatcctcacagggatttgatgcccaggataaaactcaaacc
agtgctggtgaagagggagtcaagatgacaagcactgaaaacttgttcactccaaatgaa
agtcgtatctcttctcaagaaagtgcagcatatgatcctaacttgctgtctactttcaag
tcaaactgtgaaggaaaagaagtcttgggaacagaaaatttgaaattaagtcaacaatca
gacacagagatgtcagaagagaaaactgtggcatcaggcgaaaaatcattaaaagaggta
aaactacaggaatctgggcaaatgtatgatcctaagttagagtcaaccttagctcaagat
acaccaagacgagggagaaagaggaagcaagaaacgcccaaaaaactatcaccggaaagt
agtcgaccaaagcggaacagacagggcaagggggaatgcgttaaaactcctagaggaaaa
tcangaggcaacaagagaggtaaacaaaaagagagcattcaagagaaacctttagaaaag
aaagaccaaaagaacattgtcaaggcctctgaaagtgaagtttccagaaagcacgattct
gaggaaaacttgactttgaaggagtccgaggtcatacaaagtcagtccactggaaatcct
acaactgaaatggaaaactcatgcaacattgatacacaagaagacgcaggaaaagaaaat
tgttcagtttgtgttgagaggcaatttgactcggaggggncttttttggaatcgtctcaa
ggtcaaaatttgggaaggccagataaaaaagtagaggagaagagtaaaagccaaaaaaat
gaaacatcgaaagaaataactgctgaggaaaagggtgagaagactccatcgagtcgtgtg
acgggagaaattccaccaaggaaaagtaccactaagaagaaaatagaagtcgccaagaaa
aggtctcagaaaaaaggcaagaaagaatcagagagtaaaacttcctgtatgtctgatagc
tctgaagacgatgttcctttgtcacagtcaaccaagaaagctgtgaaatccaaagggaat
ctagaagacaaaatgaacgaagtgacagagagagaaaataatagtaaaacagatgtcgag
actgctaaatcagaaagttcagatgataatattcctttaagtaagatctgtaataaggac
ngaaaacgaatggaagtggatgttacagtgaatgaccaaaactaccctgaggtaaaagaa
aatcaggcaagaaataatcaagaggataatgaaaaagaagcacctgggaaagatgaaaat
aaanggaaaaggatcgtcaaaaagaagttcgctccagctaaaacttcacccctctccaac
cgactgaggtcttcgcagggcacactgagaagcggaaaaccaacacgcaggtctctgtct
ccaagaggaagccctaagtctctctccctgaagaaaactgtcaaaagaaaaagtcttgat
cccaacatgctgacaacagtggtggaagtcttggaggaacaagccgggaagcctgttaaa
gagacggaggaacttgaaaaggcagtaagcgctgaagattatgtgtacaaagagaagaag
gaacaaaagnaacagacagcggaagacatttcagatatgctgaacggagccaaaaaggtc
tcctttggtgagacgcccaccaagnngggggacgggacggaggagggggcctttgccttg
tttgagagaaacacagacagcaagctggtggtcgtcccaaggaagtttngaaagagggtc
gtggctcggagaagcatcctgaaaccctccagtcccggctccagcctgtacaaaggatct
cccctcaggaaggccgtccctttccatcccatcaaactgggtcagatctttgccccctct
gcctcccccagcgccagcattctgaagaggagacgactcagtggagatttgcccgcaagt
tcaccctcccctcccagcaagaagaagaagaggcgtgtgtcctttgctgaccctgtgacc
tgtactggtaccccactcgctgaagcagcctcctcacccaaaagtctcgccacttctatc
aactcggacccaagcagtaagagctgtttgtttatggatgtgtctggagcaggacagaac
gacagtgaagctggtcagactcaggactcgcctgttgcctctagcctggggagttatgtc
agtgtgacagaatcccagctttctgtggaggaggcggtgtacccagagttggtggattgt
tcccagaccgtggacaaagtcctgccccagctcaccacctccatgtggtcacgtggcttg
ggacagctggtgaaggctcggaatatcaacactattggggatctctctcgtctttcggag
cgagagatcgacaacctacccatcaggtcccccaaagtctccacagtcagaaaggttctc
aaaacattcaaaacacagcaagagaaccagaagatcaagtccagcaaagctgaggactca
aaatctaaacttgatgaacaagccagtaaacaagtacttgttggagctgctgaacatgtc
ccagggcagggagacgagatagagctgctgccggccatggaggaagagatgggcaagttg
tcccccattaagaaaaatgcaaatgaagacttgaacaggagtatagctgatgaaatggtc
agttccgaggatttgttggagaaagagaaccagtggntttccgatgaaggggagtgttcc
attggattcactccgagttccactagtgtagaggagcaggaacaacaacaaccatcacaa
gtagagaaaaatgccgtgatagaaaatcttgagaaagctaccagctcgttatccgtggag
tccctggcctctatgaaaacaaacgaattgttcgaggctcatcaaaaactcttgagcatg
gctaatgcagtggcaacangcatgaaaagacggtgttcttctccggacaaaagttga
DBGET
integrated database retrieval system
