Crassostrea virginica (eastern oyster): 111114411
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Entry
111114411 CDS
T09197
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvn04054
]
111114411
Pattern recognition receptors [BR:
cvn04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111114411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
111114411
NCBI-ProteinID:
XP_022308412
EnsemblRapid:
LOC111114411
UniProt:
A0A8B8BYD6
LinkDB
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Position
9:101316612..101318773
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AA seq
667 aa
AA seq
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MLYIIQALVIGSVLLRIEAFNCSSNEKCHCVDFEGKYFANCNGLGLRSAPSFSVDVIGIC
LVNNDISEFPTSLPVGISYLDVSKNSLRGIRQNSLANYKFLRNLSVSENELKSIELGSLR
KAGHIIHLDLSLNQELTIEVLVNISHDLKNSTSIRVLNLEYLQCTFGTSFIVKQYHIADL
RHTLLEELNLASNRINSFEFGVFSMLPKTIRYLNVANNVLSYGYYLAEFGSLQNLVTLNI
SYQAFFHQVWVQNFLIGCNDTRDPCNSVKTDVERNFTENSDTGEVIGQFSSSLQRLKNIT
IYFPPKMEVLYFHDNMYKLELQDFTLKSVDGPKLTHFHLQNNIIYSLTGPITGLSSVVHA
DLSNNFCSYISPKFFNDFQNMSFLDLSHNALGEIIENDVNGNIFRNLFKLKYLNLTRNRI
VRLPDPIFRNLVHLKQLNLSYNSLSEFTIPINHKKELRWSLVIVILTATFSRILYRYRWK
LRYMYYVAREKYRDNVQGSDVTGGESSYYFDAFVSYADKDRGFVIDLVKSLEKEHNLKLC
IHHRDFIPGTGIAYNITNAIHYSRRTVCIMTSPFLESYWCMFELNMARMEAIYSREGENV
LFLVVLEKNATAKLPFSFIDLVESKSYLEFPENEDVDESSAFRSKLGATLKSHDCEFRSL
VTSSEQE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatattatccaagcgcttgtcattgggtctgttctacttaggattgaggcattt
aactgttcctcaaacgaaaagtgccattgtgttgactttgaaggaaaatatttcgccaat
tgtaacggtctcggcctgagatcagcaccatcatttagtgttgacgtcataggaatctgt
ctcgtgaacaacgatatttcagaatttcctacgtcacttcctgtgggcatcagttacctg
gatgtatctaaaaactcgctgcgaggaattcgccaaaactcactggctaattataagttc
ttgcgtaatttaagcgtgtcagaaaacgaactcaaatcgatcgaattgggatcactcaga
aaagctggacatataattcacttggatttgtctctcaatcaagagctaacaatagaagtc
ttggtgaatatttcacatgatttgaaaaactcaacttcaattcgagtgctgaatttggag
tatcttcaatgcacatttgggacaagcttcattgtcaagcaatatcatattgcagatttg
agacacacgctcctagaagagctgaatttggcgtccaatcgcatcaacagctttgagttt
ggtgtcttctcaatgttacccaaaactatcaggtatctgaatgtagcaaataatgtgctg
agttacggctattatctggccgagtttgggtctttacagaatctcgtcaccctgaacata
agttatcaggccttcttccatcaagtttgggtgcaaaattttctcattggttgcaatgat
acacgtgatccatgcaattctgtgaaaacagatgtagaacgcaacttcactgaaaattca
gacacaggagaggttatagggcaattttcttcttctttacaaaggctaaagaatatcaca
atttattttccgcctaagatggaggtgctgtatttccatgacaacatgtacaagttggag
cttcaagatttcacactcaaatcagtggatgggccaaaactgactcatttccatctacaa
aataatataatctacagtttaacgggcccaatcactggtttaagcagtgtagttcatgct
gatttatctaacaacttctgcagttatatatctcccaaatttttcaatgattttcaaaac
atgtcatttttagatctctcccataacgctttgggagaaattatcgaaaacgatgtaaat
ggaaacatttttcgcaatctgtttaagctaaaatatctaaatctgacgaggaatcgaatt
gttcgcttaccagatcccatttttcgtaaccttgttcatttaaaacaactcaaccttagt
tataactctttaagtgagtttacgattcctataaatcacaagaaagaactccgttggtca
ctagtcatcgtcatcttgactgcaacattcagccgaattctctatagatataggtggaaa
ctgaggtatatgtactatgtagcgagggaaaaataccgagacaatgtccagggttctgac
gtcacaggaggtgaaagttcatattattttgatgctttcgtctcctacgctgataaagat
agagggtttgtgatcgatttagtgaaatctctggagaaagaacacaacttaaaactgtgt
atacaccaccgcgattttatccctgggacaggaattgcatacaatatcaccaacgccatt
cattatagcagacgaactgtgtgtatcatgacgtcaccttttctggaatcttactggtgc
atgtttgaactcaatatggcgcgcatggaagccatttattctcgagagggcgaaaacgtt
ctgtttttggtcgtactagagaaaaatgccacggccaaactacctttctctttcatagac
cttgtcgaaagcaagtcatacttagagtttcctgaaaatgaggatgtcgatgaatcgagc
gctttccgttcaaaactgggagccaccctgaaatctcatgactgtgaatttagatcgcta
gtgacttcgagtgaacaggagtga
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