Crassostrea virginica (eastern oyster): 111118351
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Entry
111118351 CDS
T09197
Name
(RefSeq) actin-like
KO
K05692
actin beta/gamma 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03082
ATP-dependent chromatin remodeling
cvn04145
Phagosome
cvn04814
Motor proteins
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111118351
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111118351
09142 Cell motility
04814 Motor proteins
111118351
04820 Cytoskeleton in muscle cells
111118351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111118351
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111118351
03036 Chromosome and associated proteins [BR:
cvn03036
]
111118351
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111118351
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvn04812
]
111118351
04147 Exosome [BR:
cvn04147
]
111118351
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111118351
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
111118351
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111118351
NuA4 complex
111118351
Chromatin remodeling factors
BAF complex
111118351
PBAF complex
111118351
GBAF(ncBAF) complex
111118351
SWR1 complex
111118351
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
111118351
Cytoskeleton proteins [BR:
cvn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
111118351
Exosome [BR:
cvn04147
]
Exosomal proteins
Proteins found in most exosomes
111118351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
111118351
NCBI-ProteinID:
XP_022313465
EnsemblRapid:
LOC111118351
UniProt:
A0A8B8CCQ8
LinkDB
All DBs
Position
2:42459835..42464803
Genome browser
AA seq
379 aa
AA seq
DB search
MNDDNVRTIVIDSGSSMCKAGFAMEDTPRVVFPSIIGLPIYTDSSCQENTCGASSGLVGD
EAKKKRSILRLKYPIEHGIVVNWDAMRKIWYHTFYNELCVDPEEHPVLLTEAPLNSKINR
EKMTKLMFETFQVPAMYVSNKAVLSLFESGRGTGISLYSGDGITHTVPTYEGFPIYHAIG
TVPFAGHELTDYLMQILTERGYSFTTRSEIEIVKDIKEKLCYVALDFEQEMATATSSSSL
EKSYKLPDGQVITIDNQRFMCPEAMFQPSFLSVESAGVHETSYQSIMKCDVDIRKDLYAN
IVLSGGNTMFPGITDRMQKEVTTLAPPTMKIKVNAPSDRKYPVWTGGSILASLSTFKQMC
ISKQEYEETGPCIVHKKCF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgacaatgttcgtacgatagttatcgatagtggatccagtatgtgcaaggcc
ggattcgccatggaggatactcccagggttgtgttcccctctatcattggattaccaata
tacaccgatagttcatgtcaagagaacacatgcggtgcatcgagcggattagtgggtgat
gaggccaagaaaaaaagaagtattttaaggcttaaatacccaattgaacacggcatcgtt
gtcaactgggacgccatgaggaaaatctggtatcatactttctacaatgaactctgtgta
gatccagaggaacaccccgtcctcctgaccgaggctccactcaactcaaagatcaataga
gaaaagatgaccaaactcatgttcgaaacattccaagtccccgccatgtacgtctccaac
aaggcagtactgtcccttttcgagtctggtcgtggcactggtatctcactttactccgga
gatggtatcacacacaccgttcccacctatgagggatttcctatatatcacgcaatagga
accgtccctttcgctggacatgagcttaccgattacctgatgcaaatccttacagagcgt
ggctactctttcactacaagatccgaaatagaaattgtcaaagacatcaaggagaaactg
tgctatgttgctttggactttgagcaggagatggctactgctacgtcatcatcatcccta
gaaaaaagctacaaacttcccgacggtcaggtcatcaccatcgacaatcagcgattcatg
tgcccagaggccatgttccagccttcctttcttagtgtggaatccgccggtgtccatgaa
acatcatatcaaagtatcatgaagtgtgatgttgatatccgtaaagacttgtatgctaat
atcgtcctctctggaggtaacaccatgttcccaggtatcaccgacagaatgcagaaggaa
gtcaccaccctcgctcctccaacaatgaagatcaaggtcaacgccccatctgataggaag
tatcccgtctggactgggggttctattcttgcctctctgtccacttttaaacagatgtgt
atcagcaaacaagagtacgaggagactgggccatgcattgttcataaaaagtgcttctga
DBGET
integrated database retrieval system