Crassostrea virginica (eastern oyster): 111122645 Help Entry 111122645         CDS       T09197                                  Name (RefSeq) roquin-1-like   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cvn  Crassostrea virginica (eastern oyster) Brite KEGG Orthology (KO) [BR:cvn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cvn03000]     111122645    04121 Ubiquitin system [BR:cvn04121]     111122645 Transcription factors [BR:cvn03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     111122645 Ubiquitin system [BR:cvn04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     111122645 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-C3HC4 zf_CCCH_4 zf-C3HC4_4 zf-CCCH_4 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-RING_10 FYVE Prok-RING_4 Motif Other DBs NCBI-GeneID:  111122645 NCBI-ProteinID:  XP_022320201 EnsemblRapid:  LOC111122645 UniProt:  A0A8B8D0B6 LinkDB All DBs Position 3:complement(55447583..55474021) Genome browser AA seq 1123 aa AA seqDB search MSVHLNSAENMPAQAPQWTEFLSCQVCYNVFNETDRRPVSLACGHTVCRTCLLNLPQKKC PFDQCVITRDVNELPVNYALLQLVGAAIPTESEQPAPPIQIPEKTKHYESAKRCIEEIAL YLKPMSEGKEGCSSVAVINSGSNSILSRPMQRKVVSLVSCQLVEEEGRARAARAARSLGE RTVTELILQHQNAQQLSSNLWAAVRARGCQFLGPAMQEEVLKLILLALEDGSLLSRKVLV LFVVQRLESQYPQASKTAIGHVVQLLYRASCFKVTKRDEESSLMQLKEEFRSYEALRREH DSQIIQIAMESGLRIAPDQWSSLLYGDTNHKSHMQSIIDKLQTPQSFTQSTSELVVALQR SGDPCNLQRLRPHLEFLASIDPSPDAPTPSWENLEAVMKAVKTVVRGLVDFIQSSGSKKV DNTAYVNVRYKTSMCRDLSEKGRCPRGTNCTFAHSQEELEKFRARNKRSGRNACPASDTS TLTPKQKVQLDQITKTSLEKQRQMSGGSDSVVRDQRSARDSGSMPIIPQELTQGMNTMSL MDQVKTGDLATGSNSHIHQSHVNFQNTASQPLQPNVGSMVPPQFPMYSNAQYHPGMVQTG VYPNASQMPVGNGGMMMNMQGVGFSDMYQMEAGRGCMQHSTIPPPYPVMQQPQYPGVQYQ QFVPGFFPSGYVPYSQSPGGVQLYMDSRGTVPAGVYPSESATIMSSASPSLQDKGPRNES KLLHNLHSRRKEILAKIQSIPSSVDETETSSLLKGCAVSSPSVRDIIKDPYKTANDKFMV STKSTLNKAVSDTVNANQITSLAEVIQKVNSWSQGQDYIPWSSGDTALSVWTSSTDTKAS SSEILTDSGDLWNESSSDSTEFMLNWLKDIPDDPVPVENKETKWWLNDPSVSEQLQTTET REKEAYPRSSMSVCSDKTDEEIPFDPPIVSKFGPISRSCKTKFKSSDPVQATANQGLSTL TPVTAITPLRRPQTTAFPQETKVKKATEVGTHGYNLHAIPSGCYDQSEMGLQDYVRQELS RLEKQAQNAYTEGEALNCELKAVELQISLEDGSMFETPHSSKPEKTNFGWELESKLERPP GAWSSFEILAAATTKGMKLDDIHMALDAQKKATQTLQRKQQED NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgtctgtacatctaaacagtgcggaaaacatgccagcccaagctccgcagtggacggag tttctctcttgtcaggtgtgttacaatgtcttcaatgagacagatcggcggcctgtcagc ttggcctgtggacatactgtctgcagaacctgtttactgaatcttccccagaagaaatgt ccttttgatcagtgtgtgattactcgagatgtgaatgagttgccagtgaattatgccttg ctacagttagtgggagctgctatccctacagagagtgagcagccagcccctcccatccaa atacctgagaaaacaaaacactacgagtccgctaaaagatgtatagaagaaattgccctc tatctcaaaccgatgtctgaagggaaagaaggttgctcatcagttgctgtaataaactca ggtagcaacagtatattgagtcgtcccatgcagaggaaagttgtatccctagtaagttgt cagttggtggaggaggagggtagggctcgtgccgctcgagcagcacgctcgctgggtgag cggactgttactgagctcattcttcagcatcagaatgcacaacagttgtcatcaaacttg tgggcagccgtacgtgctcgtggatgccagtttctgggtcctgctatgcaggaagaagtg ttgaagctcatcttgttagcccttgaggatggttctttgttgtcaaggaaagtcttggtg ctgtttgtagttcagcgtctcgagtctcagtatccacaagcctctaagacagctattggc cacgttgtgcagctattataccgtgcttcttgttttaaggtaacaaaacgagacgaggaa tcctctttgatgcagttaaaggaagagttccgctcttacgaggcattgagacgagaacac gactctcagatcatccagattgccatggagtctgggctgaggatcgcccctgatcagtgg tcctctctgctctacggcgacaccaatcacaagtctcacatgcagtccatcattgataag cttcagacaccccagtcctttacccaaagcaccagcgagctagtggtggctctacagaga agtggtgacccttgtaatcttcaaagactacgcccgcatttagagtttcttgccagcatt gaccccagtcctgatgccccaacaccatcttgggaaaatttagaggctgtgatgaaagca gttaaaacagttgtccgaggattggtggactttattcaaagcagtgggtcaaaaaaggtc gacaacacggcttatgtcaatgtccgctacaaaacaagcatgtgtcgggatttgtcggag aagggccgctgtccaaggggaactaactgtacatttgctcactctcaggaagaactggaa aaatttagagcaaggaacaaaagatctggtagaaatgcttgtcctgctagcgacacatca accttgaccccaaagcagaaagtccagctagatcaaatcacaaaaacatccttggagaaa cagaggcagatgagtggtggttcggattcagtcgtcagggatcagcggtcagccagagat tctggctctatgcccattatacctcaagagctgacccaggggatgaataccatgtctttg atggaccaggttaaaactggtgatctcgccactggatccaactcccacatccaccagtct cacgtgaactttcaaaacacagcctctcaacccctgcagccaaatgttggctcaatggtg ccgcctcagtttcctatgtattccaatgctcagtaccacccagggatggttcaaacagga gtgtaccccaatgcgtcacagatgcccgttggtaatggaggaatgatgatgaacatgcag ggcgtgggtttctccgacatgtaccagatggaagctgggagaggttgtatgcagcactcc accatacctccaccctacccagtgatgcagcagccccagtacccaggtgttcagtatcag cagtttgtacctggcttcttcccgtctggttatgtcccttactcccagagtcccggcggg gttcagctgtacatggactcccgggggacagttccagcaggagtctaccccagtgagtcc gccacgatcatgtcctcagcttcgccatcgctccaggataagggccccagaaacgagtcc aaacttcttcacaatctgcacagcagaaggaaagagattttggctaaaattcaaagtatc ccctccagtgtggatgagacagagaccagttccctgctgaaggggtgtgctgtgtcctcc ccctctgtaagggacatcatcaaggacccgtacaagacggccaacgacaagttcatggtg tcaaccaagtcaaccctcaacaaagccgtcagtgacacagtgaatgccaatcagatcacc tcgctggcagaagtcattcagaaagtcaacagttggagtcagggtcaggattacatcccc tggtccagcggtgacacggctctctctgtgtggacttcttccaccgacaccaaggcctcc tcctctgaaatcctcacagatagtggcgacctctggaacgagagtagttctgacagcact gagttcatgcttaactggttgaaggacatcccagatgatcctgttcctgtagaaaataag gagacaaaatggtggctgaatgatcccagtgtgtctgagcaactacaaactactgagacc agggagaaggaggcataccccaggagcagtatgtctgtgtgttctgacaagacagatgag gagattccctttgatccacccattgtctcaaagtttggaccaatatccagatcttgtaag accaaattcaaatcctcagaccctgtgcaggcaacagcaaaccagggtttgtctaccttg actcctgtcacggccattacacctctacggaggccacagacaacggccttcccacaagaa acaaaagtgaagaaagccacagaggttggaacgcatggctacaatctccatgccatcccc tctggatgttatgaccaatctgagatggggcttcaagattatgtccgtcaggagttgtct cgactggagaaacaggcccagaatgcttacacagagggggaggccctcaactgtgaactc aaggctgtggaactccagatttcactggaagatggatccatgttcgaaaccccccacagc agtaaaccagagaagacaaattttggttgggagctggagtccaagttggagcggccccct ggagcctggagcagctttgagattttggccgctgccactacaaagggaatgaagttggat gatatacacatggcattagatgcacagaaaaaggcaacacaaacccttcagaggaagcaa caggaagactga

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