KEGG   Chlorella variabilis: CHLNCDRAFT_28217
Entry
CHLNCDRAFT_28217  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cvr  Chlorella variabilis
Pathway
cvr03030  DNA replication
cvr03410  Base excision repair
cvr03420  Nucleotide excision repair
cvr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLNCDRAFT_28217
   03410 Base excision repair
    CHLNCDRAFT_28217
   03420 Nucleotide excision repair
    CHLNCDRAFT_28217
   03430 Mismatch repair
    CHLNCDRAFT_28217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvr03032]
    CHLNCDRAFT_28217
   03400 DNA repair and recombination proteins [BR:cvr03400]
    CHLNCDRAFT_28217
Enzymes [BR:cvr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CHLNCDRAFT_28217
    6.5.1.6  DNA ligase (ATP or NAD+)
     CHLNCDRAFT_28217
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CHLNCDRAFT_28217
DNA replication proteins [BR:cvr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CHLNCDRAFT_28217
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CHLNCDRAFT_28217
DNA repair and recombination proteins [BR:cvr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CHLNCDRAFT_28217
   NER (nucleotide excision repair)
    Other NER factors
     CHLNCDRAFT_28217
   MMR (mismatch excision repair)
    Other MMR factors
     CHLNCDRAFT_28217
SSDB
Motif
Pfam: DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 17350702
NCBI-ProteinID: XP_005843412
JGI: ChlNC64A_1_28217
UniProt: E1ZSH7
LinkDB
Position
Unknown
AA seq 673 aa
KLVTWGEGKPVPFRFLADTFELIAEEPKRLVITRHLTHALRAVIATTPADLLPIVYLCTN
RVAPAHAGVELGIGDATLIKALAQATGRKESAIKAEYGECGDLGLVAAKSRGSQKPMFKP
PPLTVQKVFAAFKEIASTSGSKSQDRKVRSIVGLLAAADREEAGYVMRQLQGKLRIGLAE
QTVLVALAHAAALQREGGGAGGASEELAGRLESAAQVVKQVYSECPSYDDLVPALLAHPI
ADLPSRVHFKPGVPVKPMLAKPTNGVGEVLDKFTDREFTCEYKYDGERAQIHVLEGGKVK
IYSRNSEDNTGKYPDIAALVPGQLRPGVTSLVLDAEAVAWDRQHNRVLPFQVRWQGVCVC
VCVCVCVCVCVCVYTDVTHLFQSSVLLPPTRTRHPPIHPHTHTHTHMQTSRDVEELTRFL
DESVEAGTEGLIVKTTEDAYEPSKRSSHWLKLKKDYLEGVGDTFDLVPIGAWFGKGKRTG
MYGSYLLAAYDPDTEEYQTISKIGTGFSEEQLKQLAEQMEGLVIPDAKKYYRHVLGVTLI
PDVWFDAKSVWEIKAADLSISPVHKAAIGQVDPAKGISIRFPRLVRVRDDKGPEDATSAE
QVAEMYRKQVGGAAAVRRPCIPATSPSSPALAPCWCRLSPPSVCLPCVAAPTAEQAVMNQ
GQKGGGGGGEDDD
NT seq 2022 nt   +upstreamnt  +downstreamnt
aagctggtgacgtggggtgagggcaagcctgtgcccttccgcttcctggccgacaccttt
gagctgattgccgaggagcccaagcgccttgtgatcacccgccacctcacccacgccctg
cgtgccgtcatcgccaccacgcccgccgatctgctgcccatcgtctacctgtgcaccaac
cgggtggcgcccgcgcacgcgggggtggagcttggcattggcgacgccacgctcataaag
gcgctggcgcaggccaccgggcgcaaggagagcgccatcaaggcagagtatggcgagtgc
ggcgacttgggcctggtggcggccaagtcgcgcggcagccagaagccgatgttcaagccg
ccgccgctgacggtgcagaaggtgtttgccgccttcaaggagattgcctccaccagcggc
agcaagagccaggaccgaaaggtgcggtccatcgtgggactgctggcggcggcggaccgc
gaggaggcgggctacgtcatgcgccagctgcagggcaagctgcgcatcgggctggcggag
cagacggtgctggtggcgctggcgcacgcggcagcgctacagcgggagggcggcggcgcg
ggcggggccagcgaggagctggcagggcggctggaaagcgcggcgcaggtcgtgaagcag
gtgtacagcgagtgcccgtcttacgacgatctggtgcccgccctgctggcgcaccccatc
gccgacctgccctcccgcgtgcacttcaagcccggggtgcccgtcaagcccatgctggcc
aagcccaccaacggcgtcggcgaggtgctggacaagttcaccgaccgcgagttcacttgc
gagtacaagtacgacggcgagcgggcgcagatacacgtgctggagggagggaaggtcaag
atctacagccgcaacagcgaggacaacacgggcaagtacccggacattgcggcgctggtg
cccgggcagctgaggccgggggtgaccagcctggtgctggatgcagaggcggtggcctgg
gaccgacagcacaacagggtgctgccattccaggtgaggtggcagggtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacactgacgtcacacacctc
tttcagtcctctgtcctcctgccacccacacgcacacgccacccacccatccacccacac
acacacacccacacacacatgcagacctcccgggatgtggaggagctgacccgcttcctg
gatgagtcggtggaggcgggcacagaggggctgatcgtgaagaccacggaagatgcgtac
gagcccagcaagcgcagcagccactggctgaagctgaagaaggactacctggagggtgtg
ggggacacctttgacctggtgcccataggagcctggttcggcaagggcaagcgcacaggc
atgtacggctcctacctgctggctgcctacgacccggacacggaggagtaccaaaccatc
agcaagatcggcaccgggttcagcgaggagcagctgaagcagctggcggagcagatggag
gggctggtgatcccagacgccaagaagtactacaggcacgtgctgggcgtgacgctgatc
ccggatgtgtggtttgatgccaagtcggtgtgggagatcaaggccgcggatctgtccatc
agcccggtgcacaaggcggccatcgggcaggtggacccagccaaaggcatttccatcagg
ttcccgcgcctggtgcgggtgcgcgacgacaagggccccgaggatgccacctcagcggag
caggtggcagagatgtaccgcaagcaggtggggggtgcggcggcggtacggcgcccttgc
atccccgccacctcgccatcatcgccggcgctggccccctgctggtgccgcttgagccca
ccttctgtctgcctgccctgtgtggctgcgcccactgctgagcaggccgtgatgaaccag
gggcagaagggcggcggcggcggcggcgaggacgacgactga

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