Chlorella variabilis: CHLNCDRAFT_29663
Help
Entry
CHLNCDRAFT_29663 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12874
intron-binding protein aquarius
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_29663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_29663
Spliceosome [BR:
cvr03041
]
Complex B
Other components
Prp19-related factors
CHLNCDRAFT_29663
Complex C
CHLNCDRAFT_29663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
UvrD_C_2
AAA_30
UvrD-helicase
ResIII
AAA_16
AAA_22
DEAD
AAA
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
17358633
NCBI-ProteinID:
XP_005851348
JGI:
ChlNC64A_1_29663
UniProt:
E1Z3W6
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MADISADKLTLLAKENWSAGAAGDDGKRPAYKAELVAQIYREELGGDSNKPPTNRRVQLL
EISQYLENYLWPHFEAGMAGSAAYQHLMSMVVMVNQKFREQVPGWACFQQQNKDFPTFFQ
HVLMVKTEQEAGGRMRMHEKVAYLVFAINAFQSLEDEAVRAQVLRLVSLPLWHALSRGRL
QLELHDQPQLAKHWRHLAKKEAKAAQQEGHVPVHQRPEATFLPGKPWPQAGQSSLLTEYL
EVLSAVVPEEQAMEEDGQEAAVGGSGKLDRQALLYCERFVEFLTDLLSQLPTRRFVHAVL
EDRAVLVKCYMSRLYTHPEGRLYVQLVDLLRFYLSFPIHDHTGDPLSEEDVTAAHYEHVQ
QLQRLFFKHVPKLRELALANCGTVEKREVLRKELAALNPEELRFLVTRQLRCAAVDGLVS
DDDPWADDAGFLAEVMIATYEHRRSQAETINEMPLYPTEAVLFDENQVPTMHYTGEGVLA
LPKLNLQFLTFADYMLRNFNLFRLEATYEIREDIADVLKRVGPYLGDDERVGFSGWARMA
QLIDKFAVTEVRKPKVGENKPAAVTAEITINLATLRPDVRAEWDELKQHDVLFLLTIRPP
DSITANYMAQSGQGVGKEGGVGVMERSGLQYVRGCEVIELRDEDGKLMNDFTGRVRLDER
TPPVGAIRTVTVALDTAQYQMDMNYLAKQQQGGGASEDVYGTFNMLMRRKAKENNFKAVL
ESIRDLMNEDCVLPPWLHDILLGYGDPGAAQYKHMDGCLQTVDFKDTFLDADHVREAFPG
WKIEFRNGSRSPQLERPFRITFPPLKEEEEAVGGKVKRKPADDGAAEQAAGSKGKLVVES
YTPVDPGPYPQDLPPQNRVRFTPVQTQAIMSGVQPGLTMVVGPPGTGKTDTAVQIMHILY
HNCPSQRTLVVTHSNQALNDLFSKIVERDVPARYLLRLGMGEAELETDLDFSRVGRVNAM
LARRLELLAEVERLAKLLKVSESVAYTCETAGHFWLLHVLARWEKFVAQCSTSKSADCVK
ELFPFTEFFADAAQPLFKGERYEEDMEKAQGCFRHLRTMFRELEEIRPFELLKSSADRVN
YLMTKQAKIVAMTCTHAALKRKEFLELGFKYDNLLMEESAQILEIETFIPVLLQRQEDGH
NRLKRVILIGDHHQLPPVVKNMAIQQYSHLDQSLFTRFIRLGTPYIELNAQGRARPTLAK
LYNWRYRDLGDLPSVSQEPAFVTANPGFALDFQLVDVPDFNGRGESCPLPYFYQNLGEAE
YLVSVYQYMRLLGYPAHKVSVLTTYNGQKALLRDVFERRCAHHPAFGRPAKVTTVDKFQG
QQNDYVLLSLVRTNHFGHLRDVRRLVVAMSRARLGLYVFGRANLFSNCYELQPTFSQLLA
RPLQLALVPGEHYGHCSRKLDAVPPVQLVSGVEQMAGIVQFMCQQWEEAAAAWARSSAVQ
GGSDVAAVAAGAVEQALHATAPAGEGQEGDGEEGEEEEGGSEEEGSSGVDEEEEQQVGTA
PMQQG
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatcagcgccgataagctcactctactcgccaaggagaactggtcggcgggt
gcagcaggcgatgatggcaagcgaccggcatacaaggctgagctggtggcccagatctat
cgcgaggagctgggcggtgacagcaacaagccgcctaccaaccgcagggtccagctgctg
gagatcagccagtacctggagaactacttgtggccgcactttgaggcaggcatggcgggc
tcggccgcctaccagcacctcatgagcatggtggtgatggtcaatcagaagtttagggag
caggtgcccggctgggcctgctttcagcagcaaaacaaggacttccccactttcttccaa
cacgtgctgatggtgaagacggaacaagaggcgggcgggcgcatgcgaatgcatgagaag
gtggcctacttggtgtttgctatcaatgctttccagtcgctggaggacgaggcggtgcgg
gcgcaggtgctgcgtctggtcagcctgccgctgtggcacgcactgagcaggggcaggctg
cagctggagctgcacgaccagccgcagctggccaagcactggcggcacctggccaagaag
gaagccaaggcggcacagcaggagggccatgttcctgtccaccagcgccccgaggccacc
ttcctgccaggcaagccctggccccaagccggccaatccagtctgctgaccgagtacctg
gaggtgctttcggccgtcgtgcccgaggagcaggcgatggaggaggatgggcaggaggcg
gcagtaggtggcagcggcaagctggaccgccaggcgctgctctactgcgagcggtttgtg
gagttcctgactgacctgctatcgcagcttcccactcgccggtttgtgcatgccgtgctg
gaggaccgtgccgttcttgtcaagtgctacatgtcgcgcctttacacacatccagagggc
cgcctctatgtgcagctggtggatctgctacgtttttacctgtctttccccatccacgac
cacaccggcgacccgttgagcgaggaggatgtgaccgcggcacactatgagcatgtgcag
cagctgcagcgcctcttcttcaagcatgtgcccaagctgcgcgagttggctctggcaaat
tgtggcactgttgagaagcgtgaggtgctgcgcaaggagctggcggcgctgaaccctgag
gagcttcgcttcctggtcacgcgccagctcaggtgtgcggctgtggatgggctggtgtct
gacgacgacccctgggctgatgatgcgggcttcctggcggaggtcatgattgccacctac
gagcaccgccgctcacaagcggagacgatcaacgagatgccactgtaccccactgaggcg
gtgctgtttgatgagaaccaggttcccacgatgcattacacaggggagggcgtgctggcc
ctgcccaagcttaacctgcagttcctcacctttgccgactacatgctgcgcaacttcaac
ctgttccgcctggaggcaacctacgagatacgggaggacattgctgacgttctcaagcgc
gtggggccctacctcggcgacgacgagcgggtcgggttcagcgggtgggcgcgcatggct
cagctcattgacaaatttgctgtcaccgaggtgcgcaagcccaaggtgggcgagaacaag
ccggctgcagtcacagccgagatcaccatcaacctggccaccctacggcccgatgtgcgg
gcagagtgggacgagttgaagcagcacgatgtgctcttcctcctcactatccgccccccc
gactccatcacggccaactacatggcgcagtccggacagggcgtcggcaaggagggcggc
gtgggtgtgatggagcggtcaggactgcagtatgtgcgcggctgcgaggtgatcgagctt
cgtgatgaggatggcaagctgatgaacgacttcacaggacgtgtgcgcctggacgagcgc
acgccgccggtgggcgctatccgcaccgtcactgtggccctggacactgcccagtaccag
atggacatgaactaccttgccaagcagcagcaggggggcggcgccagcgaggacgtgtat
ggcaccttcaacatgctcatgcgccgcaaggccaaggagaacaatttcaaagcggtgctg
gagtcaatccgcgacctcatgaatgaggactgcgtgctgccgccctggctgcacgacatc
ctgctgggctatggcgaccccggtgccgcgcagtacaagcacatggatggctgcctgcag
actgtggacttcaaggatactttcctggatgctgaccacgtgcgcgaggcattcccaggg
tggaagattgagtttcggaacggcagccgcagcccgcagcttgagcgccccttccgcatc
accttccccccgcttaaagaggaggaggaggcggtaggcggcaaggtcaagcgcaagccg
gcagatgatggcgcggcggagcaagcggcaggcagcaagggcaagctggtggtagagtcg
tacacgccagttgacccaggcccatacccgcaggacctgccgccgcagaaccgcgtgcgc
ttcacgccggtgcagacacaggccatcatgagtggggtgcagcctgggctgaccatggtg
gtgggcccaccaggcacgggcaagacggacacggcggtgcagatcatgcacatcttgtac
cacaactgccccagccagcgcacgctggtggtcacccactctaaccaggccctgaatgat
ctgttcagcaagattgtcgagcgcgacgtgccggcccgctacctgctgcgcctgggcatg
ggtgaggccgagctggagacagacctggacttcagccgggtggggcgcgtcaacgccatg
ctggcgcgcaggctagagttgctagcagaggttgaacgtctggctaagttgctcaaggtg
agcgagagcgtggcatacacgtgcgagacggcaggccacttctggctgctgcacgtgctg
gcacggtgggagaagtttgtggcacagtgcagcaccagcaagagtgcagactgcgtaaaa
gagctctttcctttcaccgaattctttgctgacgcggctcagccgctgttcaagggggag
cggtacgaggaggacatggagaaggcgcagggttgcttccgccacctgcgcaccatgttc
cgcgagctggaggagattcggccctttgagctgctcaagtctagcgccgaccgcgtcaac
tacctgatgaccaagcaggccaaaatcgtggccatgacttgcactcatgcagctctcaag
cgcaaggagtttctggagctgggtttcaagtacgacaacctgctgatggaggagagtgct
cagatcttggagattgagacgttcatccccgtgctgctgcagcgccaggaggacggccac
aaccggctgaagcgcgtgatcctaattggcgatcaccaccagctgcccccagtggtgaaa
aacatggcgatccagcagtacagccatctggaccagtccctgttcacccggttcatccgc
ctggggacaccctacatcgagctcaatgcgcagggacgagcacgtcccacgctggccaag
ctgtacaattggcggtatcgcgacctgggcgatctgccctctgtcagccaggagcccgcc
tttgtgaccgccaaccctggctttgcgctcgacttccagcttgtcgacgttccggacttc
aatggccgcggcgagagctgcccgctgccctacttctatcagaacctgggcgaggccgag
tacctggtgtctgtgtaccagtacatgcgcctgctggggtaccccgcacacaaagtttcc
gtcctcaccacatacaacggacaaaaggcgctgctgcgcgatgtgtttgagcggcgctgc
gcacaccaccccgcctttggtcggcccgcaaaggtaaccactgttgacaagtttcagggg
cagcagaatgactatgtgctgctcagcctggtgcgcaccaaccactttggccacctgcgt
gatgtgcgccgccttgtggtggccatgtcccgtgctcgtctgggcctgtacgtgtttggc
cgtgcaaacctcttttccaactgctacgagctgcagccgacgttcagccagctgctcgca
cggccgctgcagctagcgctggtgccaggggagcattatggacactgcagccggaagctg
gacgcagtgccgccggtgcagctggtcagcggcgtggagcagatggcggggatcgtgcag
ttcatgtgccagcagtgggaggaggcggcggcggcctgggcccgcagtagtgcggtgcag
ggcgggagcgacgtggcagcggttgcagctggtgcagtggagcaggcgttgcatgctacc
gcgccggcaggggaggggcaggagggagacggtgaggagggcgaggaggaggagggcggc
agcgaggaggagggcagcagcggagtggatgaagaggaggagcagcaagtaggaaccgcg
cccatgcagcagggctga
DBGET
integrated database retrieval system
