Cellulomonas wangsupingiae: NP075_05420
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Entry
NP075_05420 CDS
T09069
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cwn
Cellulomonas wangsupingiae
Pathway
cwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP075_05420 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cwn03021
]
NP075_05420 (rho)
03019 Messenger RNA biogenesis [BR:
cwn03019
]
NP075_05420 (rho)
Transcription machinery [BR:
cwn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NP075_05420 (rho)
Messenger RNA biogenesis [BR:
cwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NP075_05420 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
FANC_SAP
VAD1-2
Motif
Other DBs
NCBI-ProteinID:
UUI66163
LinkDB
All DBs
Position
1158976..1160982
Genome browser
AA seq
668 aa
AA seq
DB search
MTDTIDAAASTTGGSGSGSISAMRLPELQALAAQLGVKSTSKMRKGDLVQAISAARSGER
PEPVEARTATRRARTVVEEQTEAPTQTAPAERPVRARERSGGGRDALATLEAVLDARLAP
HEQRDDRAARAADAVGAVTGERRSRRAGRGAGAPVGADGAPQGEPAERQRAEREPERQQG
DRQQAERQQGDRQQGDRQQVERDQGERRQATQGTQGGPNPQGAEHQDDDERGGRRRRSRD
RYRDRDRDRDRKRGRPRGGQGDLPGLDEVEVTDDDVLLPVAGILDVLDSYAFVRTTGYLP
GPNDVYVSLNQVKKHGLRRGDAITGAVRQPREGEQAPQGNRPSKFNALVRLDAVNGSDPE
EARQRPEFTKLTPLYPQERLRLETEPGRLTPRVIDIVAPIGKGQRGLIVAPPKAGKTIIM
QQIANAIAANNPEVHLMVVLVDERPEEVTDMERTVKGEVIASTFDRPASDHTIVAELAIE
RAKRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIE
NGGSLTILASALVETGSKMDEVIFEEFKGTGNMELRLSRSLADKRIFPAVDVNASGTRRE
EVLMSNDELKIVYKLRRVLGGLDQQQAIELLLGKLRETKSNVEFLLQVQKTTPGHNGPAL
EDGVGKVV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccatcgatgccgccgcgagcaccacgggcggctcgggctccgggagcatc
tccgcgatgcgactgccggagctccaggcgctcgccgcacagctcggcgtgaagagcacg
agcaagatgcgcaagggcgacctggtgcaggcgatctccgccgcccgctccggcgagcgg
ccggagcccgtggaggcgcgcacggcgacgcgccgcgcgcggaccgtcgtcgaggagcag
accgaggcgcccacgcagaccgcgccggccgagcgtcccgtgcgtgcgcgggagcgctcc
ggtggcggccgtgacgcgctggcgaccctcgaggcggtgctcgacgcgcggctcgctccg
cacgagcagcgtgacgaccgggcggcccgggccgcggacgcggtcggtgccgtgaccggc
gagcggcgctcgcgccgtgccggccggggtgccggggcaccggtcggcgccgacggcgcg
ccgcagggcgagcccgccgagcgtcagcgggccgagcgcgagcccgagcgtcagcagggt
gaccgtcagcaggccgagcgccagcagggcgaccgccagcagggcgaccgtcagcaggtg
gagcgcgaccagggtgagcgtcgccaggcgacgcagggcacccagggcgggccgaacccg
cagggcgccgagcatcaggacgacgacgagcgcggcgggcggcggcgacgctcgcgggac
cgctaccgcgaccgggaccgtgaccgggaccgcaagcgcggccgtccccgcggcggccag
ggtgacctgccgggtctggacgaggtggaggtcacggacgacgacgtgctgctgcccgtc
gccggcatcctcgacgtgctggactcgtacgccttcgtgcggacgaccggctacctgccc
ggcccgaacgacgtgtacgtctcgttgaaccaggtcaagaagcacggcctgcgccgtggc
gacgcgatcaccggagcggtccggcagccccgtgagggcgagcaggcgccgcagggcaac
cgccccagcaagttcaacgccctggtgcggctggacgcggtcaacggctcggacccggag
gaggcgcgccagcgtccggagttcacgaagctcacgccgctgtacccgcaggagcggctg
cgcctggagaccgagcccggccggctgacgccccgcgtcatcgacatcgtcgcgccgatc
ggcaagggccagcgcggcctgatcgtcgcgccaccgaaggccggcaagacgatcatcatg
cagcagatcgccaacgcgatcgccgcgaacaaccccgaggtccacctcatggtcgtgctc
gtcgacgagcgccccgaggaggtcacggacatggagcggaccgtgaagggcgaggtcatc
gcctcgaccttcgaccgtcccgcgtccgaccacacgatcgtggcggagctcgcgatcgag
cgggccaagcgcctggtcgagctcggtcaggacgtcgtcgtgctgctcgactcgctgacg
cgcctgtcacgcgcctacaacctcgcggcgccggcctcgggccgcatcctgtccggcggc
gtcgacgcctcggcgctctacccgcccaagcggttcttcggcgcggcccgcaacatcgag
aacggcggctcgctgacgatcctcgcctcggcgctggtcgagacgggctcgaagatggac
gaggtcatcttcgaggagttcaagggcaccgggaacatggagctgcggctgtcgcgctcg
ctcgccgacaagcgcatcttcccggcggtggacgtcaacgcgtccggcacccgccgcgag
gaggtgctcatgagcaacgacgagctgaagatcgtctacaagctgcgtcgcgtgctcggc
gggctggaccagcagcaggccatcgagctgctgctgggcaagctccgcgagacgaagtcg
aacgtcgagttcctgctgcaggtgcagaagacgacgcccggccacaacggccccgccctc
gaggacggcgtcggcaaggtcgtctga
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