KEGG   Conexibacter woesei: Cwoe_4716Help
Entry
Cwoe_4716         CDS       T01153                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cwo  Conexibacter woesei
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cwo00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Cwoe_4716
Enzymes [BR:cwo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Cwoe_4716
DNA repair and recombination proteins [BR:cwo03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Cwoe_4716
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5032785..5035232)
Genome map
AA seq 815 aa AA seqDB search
MAPALDVCPIALPGYGPPMSPRRDSLDAYRAKRDFGATIEPAPGDAAAARSSRADDAPAE
FVVQQHDATRLHWDLRLERDGTLASWALPRGLPLDPHDDRIAVRTEDHPLEYLDFHGEIP
KGSYGAGTMEIFDRGTYDVHEFTDRKVEVTLHGERGRAVGRYGLFPLGRRAERADGPQGD
WMIHRMEPPADPEREPLPEHLLPMLAKAGELPAAREDDAWGYEIKWDGVRALLWSDHGHV
RVQSRTQREIAERYPEVKPIGRALGAHEVVLDGELVALDEHGKPSFERLQSRMNAGSEGA
IRRAARAVAVTYVIFDLLHLDGRSLLHEPYATRREALRALSLDGAAWRTPAYHRGHGAAL
LAATREQGLEGIVAKRLDGVYEPGRRSGAWRKLRNRLRQELVIGGWLEGEGNRAQRIGAL
LVGDREQDGGPLRYAGRVGSGLTEAMLDDLLARLRARERAGSPFAPAPAAARIPRGAHWV
EPELVADVEYSERTSEGLLRQPVFKGLRDDKPPELVVRERADLRGQRFSNWDKVLYPASG
FTKGDLIDYYVAIAPTLLPHLQDRPITLRRWPDGVEGRSFYEKNAPSHRPDWVQTASIFS
RSERRRIDYCLVQDTATLAWTANLAAIELHPSLSLARAMSHPTAVVFDLDPGEPAGLPEC
AEVALVLEGLFGQLGLRSVVKTSGSKGLQVYVPLGERAATYEQTKPFAKRIAELLERRLP
DLVVARMSKRLRAGKVLVDWSQNDEHKTTVAVYAVRARDRPTVSTPLSWEELRAAHAAGV
ADRLAFEPADVLARVADQGDLFASMLGSAQELPQL
NT seq 2448 nt NT seq  +upstreamnt  +downstreamnt
atggcccccgcgctggacgtatgtccgatcgccctgcccgggtacggtccccccatgagc
ccgcgccgcgacagcctcgacgcgtaccgcgccaagcgcgacttcggcgcgacgatcgag
ccagcgccgggcgatgccgccgccgcgcgctcctcgcgcgcggacgacgcgccggccgag
ttcgtcgtccagcagcacgacgccacccgcctgcactgggacctgcggctggagcgcgac
ggcacgctcgcctcgtgggcgctgccgcgcgggctcccgctcgacccgcacgacgatcgc
atcgccgttcgcaccgaggaccacccgctcgagtacctcgacttccacggcgagataccg
aagggcagctacggcgccggcacgatggagatcttcgaccgcggcacctacgacgtgcac
gagttcaccgacagaaaggtcgaggtcacgctgcacggcgagcgcggccgcgcggtcggg
cgctacggcctcttcccgctcgggcgcagagccgagcgcgcggacggcccgcagggcgac
tggatgatccaccggatggagccgccggcggatcccgagcgggagccgctgcccgagcac
ctgctgccgatgctcgcgaaggccggcgagctgcccgccgcgcgcgaggacgacgcgtgg
ggctacgagatcaagtgggacggcgtgcgggcactgctgtggtccgaccacggtcacgtc
agagtccagagccgcacgcagcgcgagatcgccgagcgctatccggaggtcaagccgatc
ggtcgcgcgctcggcgcccacgaggtcgtgctcgacggcgagctggtcgcgctcgacgag
cacggcaagccgagcttcgagcggctgcagagccgcatgaacgcgggcagcgagggcgcg
atccggcgcgccgccagagcggtcgcggtcacctacgtgatcttcgacctgctgcacctc
gacggccgctcgctgctgcacgagccgtacgcgacacgccgcgaggcgctgagagcgctg
agcctcgacggcgccgcctggcgcacgccggcgtaccaccgcggccacggcgcggcgctg
ctcgcggcgacgcgcgagcaggggctggaggggatcgtcgccaagcggctcgatggcgtc
tacgagcccggccgccgcagcggcgcgtggcgcaagctgcgcaaccggctgcggcaggag
ctggtgatcggcggttggctggagggggagggcaaccgcgcgcagcggatcggcgcgctg
ctcgtcggcgaccgcgagcaggacggcggcccgctgcgctacgccggccgcgtcggcagc
ggcttgaccgaggcgatgctcgacgacctgctcgcgcggctgcgcgcacgtgagcgagca
ggctcaccgttcgcaccggcgccggccgcggcgagaatcccgcgcggcgcccactgggtc
gagcccgagctggtcgccgacgtcgagtacagcgagcgcacgagcgagggcctgctgcgt
cagcccgtcttcaagggattgcgcgacgacaagccgccggagctcgtcgtgcgcgagcgc
gccgacctgcgcggccagcggttcagcaactgggacaaggtcctctacccggcgagcggg
ttcacgaagggcgacctgatcgactattacgtcgcgatcgcgccgacgctgctgccgcac
ctgcaggaccgcccgatcacgctgcggcgctggcccgacggcgtcgagggcagatcgttc
tacgagaagaacgcgccgtcacaccggcccgactgggtgcagacggcgtcgatcttcagc
cgcagcgagcgcagacggatcgactactgcctcgtgcaggacacggcgacgctcgcgtgg
acggcgaacctcgcggcgatcgagctgcatccgtcgctgtcgctcgcgcgcgcgatgagc
cacccgacggccgtcgtcttcgacctcgaccccggcgagcccgccggcctcccggagtgc
gccgaggtcgcgctggtgctcgaaggcctgttcggccagctcggtctgcgcagcgtcgtc
aagacgtcgggctcgaaggggctccaggtctacgtgccgctcggcgagcgggccgcgacg
tacgagcagacgaagccgttcgcgaagcggatcgccgagctgctggagcggcggctgccc
gacctcgtcgtcgcgcgcatgtcgaagcggctgcgggccggcaaggtgctggtcgactgg
agccagaacgacgagcacaagacgacggtcgcggtctacgcggtccgcgcgcgggatcgg
cccacggtgtcgacgccgctgagctgggaggagctgcgtgcggcgcacgcagcgggcgtc
gccgaccgcctcgcgttcgagcccgccgacgtgctggcccgcgtcgccgaccagggcgac
ctgttcgcatcgatgctcggatccgcccaggagctgccgcagctctga

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