Cyanobium sp. NIES-981: CBM981_0241
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Entry
CBM981_0241 CDS
T04888
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi03410
Base excision repair
cyi03430
Mismatch repair
cyi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBM981_0241 (recJ)
03430 Mismatch repair
CBM981_0241 (recJ)
03440 Homologous recombination
CBM981_0241 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyi03400
]
CBM981_0241 (recJ)
DNA repair and recombination proteins [BR:
cyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CBM981_0241 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CBM981_0241 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CBM981_0241 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
SBO41952
UniProt:
A0A182AK60
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All DBs
Position
I:complement(196418..198349)
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AA seq
643 aa
AA seq
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MARPLLQQPLLPPLHEQRWQLPAPLGELADPELLQKLNPAPLSRLPDPLLAVLARRGYAS
AEAITDLLNPPEAPQACEHFADLEPAVARLQRACLAGEAVAICGDYDADGMTSTALLLGV
LERLGARPVAAIPSRMAEGYGLNAAMVERLAAEGVQLLVTVDNGIAAAEALARAQALAVE
VIVTDHHSIPAQLPPLLALLHPQRTPADSPYRGLAGVGLAYVLAAALCEAMGRGDALQMA
RDLFCIGTIADMAPLSGVNRRWLIDGLPRLGHSGLAGLQALQQVAGVDDRPLDAQAVGFQ
IAPRINAVGRLGDPRLVVELLTTTDADRALELAGQCEALNRQRRELCEAIEAEALALLEA
DGPHRPRFILLAQGHWHHGVIGIVAARLVERLGLPAALLAGEGGGLLRASVRAPRGFAVD
QALNHCADLLERHGGHPAAGGFTVRAEHVARLHERLDALAATWLASHGGGHPVEPEALLR
LEQIDRDFVRHQQRLEPFGIGHPQPVFWSAACRVTQQKLLRGGHLQLELSQGERSLRAMG
WRWQGAADLPPWVDVAYRVKIDRWQGQERLQLELVGLRGSDPPGGEREVRLQRRSRTYWC
RRQGDGLVVRNAAGEELHSSSAPEHPYLRALLQDAAMALGLSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcccctgcttcagcagccgttgctccccccgctccatgagcaacgctggcag
ctgcccgcccccctgggggagctggccgatcccgagctcctgcagaagctcaacccggcc
cccctctcccgcctgcccgatccgctgctggcggtgctggcccgacgcggctacgccagc
gccgaggcgatcaccgacctgctgaaccctccggaggccccgcaggcctgcgagcacttc
gccgatctcgagcctgcggtggcccggctccaacgcgcctgtctggccggcgaggccgtg
gcgatctgcggcgactacgacgccgacggcatgaccagcaccgccctgctgctcggtgtg
ctcgaacggctcggggcgcggccggtggcggccattcccagccggatggcggaggggtac
gggctcaacgccgccatggtggaacggctggcggccgagggcgtgcagcttctggtgacc
gtggacaacggcattgccgccgcggaggccctcgcccgggcccaggccctggccgtggag
gtgatcgtgaccgaccaccacagcatccccgcgcagctgccgcccctgctggccctgctg
cacccgcagcgcaccccggcggattcgccctacaggggcctggccggcgtggggctggcc
tacgtgctggcggcggccctctgcgaagccatggggcggggcgacgccctgcagatggcc
cgcgacctgttctgcatcggcaccatcgccgacatggctcccctcagcggggtgaaccgc
cgctggctgatcgatggcctgccccggctcggtcactcgggcctggcgggtctgcaggcg
ctgcaacaggtggcgggggtggacgaccgcccgctggatgcgcaggccgtgggcttccag
atcgccccccggatcaatgcggtgggccggctcggtgatccccggctggtggtggaactg
ctcaccaccacggatgcggacagggcgctggagctggccgggcagtgcgaggcgctcaac
cgccagcgccgggagctgtgcgaagcgatcgaagccgaggccctggccctgctcgaggcc
gacggtccgcaccggccccgcttcatcctgctggcccagggccactggcaccacggcgtg
atcggcatcgtggccgccaggctggtggagcggctggggttgccggccgccctgctggcc
ggcgaaggcggggggctgctgcgggcctcggtgcgggcaccccgcggtttcgccgtggac
caggccctgaaccactgtgccgatctgctggagcggcacggtggccatcccgccgccgga
ggcttcaccgtgcgggccgagcacgtggcccggctgcatgagcgcctcgacgccctggcc
gccacctggctggccagccacggcggcggccatcctgtggaaccggaagcgctgctgcgg
ctcgagcagatcgaccgcgacttcgtgcgccaccagcaacgcctcgaacccttcggcatc
ggccacccccagccggtgttctggagcgccgcctgccgggtgacgcagcagaaactgctg
cgcggcggccatcttcagctggagctgagccagggggaacgcagcctgcgggcgatggga
tggcgctggcagggggccgccgacctgccgccctgggtggacgtggcctaccgggtgaag
atcgaccgctggcagggccaggaacggctgcagctggagctggtgggactgcgcggcagc
gacccccccggcggggagcgggaagtgcgcctgcagcgacgctcccgcacctactggtgc
cgccgccagggcgatggcctggtggtgcgcaacgccgccggcgaggagctgcacagcagc
agcgcccccgagcacccctacctgcgggccctgctgcaggatgccgccatggctctcggt
ctcagcgcctga
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