Cyanobium sp. NIES-981: CBM981_1186
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Entry
CBM981_1186 CDS
T04888
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cyi
Cyanobium sp. NIES-981
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cyi03110
]
CBM981_1186 (clpC)
Chaperones and folding catalysts [BR:
cyi03110
]
Heat shock proteins
HSP100
CBM981_1186 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
UVR
Sigma54_activat
TniB
nSTAND3
AAA_14
ATPase_2
AAA_28
IstB_IS21
Zeta_toxin
TsaE
AAA_18
NACHT
AAA_3
AAA_25
Torsin
EAP30
T2SSE
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
SBO42897
UniProt:
A0A182AM09
LinkDB
All DBs
Position
I:1077448..1079973
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AA seq
841 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR
VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLAKVRTQVIRMLGETAEVAAGGGGKGSTKTPTLDEFGSNLTQQAADGKLD
PVVGRQHEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRINSGDVPDILEDKRVL
TLDIGLLVAGTKYRGEFEERLKKIMEEIRGAGNVILVIDEVHTLIGAGAAEGAIDAANIL
KPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEDTIEILRGLKERYEE
HHRLKIADEALIAAATLGDRYISDRFLPDKAIDLIDEAGSRVRLMNSKLPPAAKEVDKQL
RAVQKQKEEAVREQDFTKAGELRDREVELREQIRSILQARKDEEPGIAEADGSVATVTED
GERSPMVSEEDIAHIVASWTGVPVQKLTESESAKLLNMEETLHQRLIGQDEAVKAVSRAI
RRARVGLKNPNRPIASFIFSGPTGVGKTELTKSLAAYFFGSEEAMIRLDMSEFMERHTVS
KLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQLLEDGRLTDSKG
RTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGSDAEETQYNRIRSLVNEELKQYFRPE
FLNRLDEIIVFRQLTRDEVKEIAEIMLKEVFSRMDDKGIHLSVTEAFKERLVEEGYNPSY
GARPLRRAVMRLLEDSLAEEFLSGRIGEGDSAVVDVNDDKQVVILKQNAMPAIPELAGAG
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagcggtttaccgagaaggccatcaaggtgatcatgctggcccaggaagaggcc
cgccgccttgggcacaactttgtgggcactgagcagatcctgctgggtctgatcggtgag
ggcacgggcgtcgccgccaaggtgctcaagtcgatgggggtcaacctcaaggacgcccgg
gtcgaggtggagaagatcatcggccgtggctccggcttcgtggccgtggagattcccttc
acccccagggccaagcgggtgcttgagctctccctggaggaggcccgccagctcggccac
aactacatcggcaccgagcacctgctgctgggtctgatccgggaaggcgagggcgtggcc
gcccgggtgctcgagaacctcggtgtggatctcgccaaggtgcgcacccaggtgatccgc
atgctcggcgagaccgccgaggtcgccgccggtggcggtggcaagggctccaccaagacc
cccaccctcgacgagttcggcagcaacctcacccagcaggccgccgacggcaagctcgac
cccgtggtgggccggcagcacgagatcgagcgggtgatccagatcctcgggcgccgcacc
aagaacaatcctgtgctgatcggcgagcccggcgtcggcaagaccgccattgccgagggc
ctcgcccagcgcatcaactccggcgacgtgccggacatcctcgaggacaagagggtgctc
accctcgacatcggcctgctggtggccggcaccaagtaccgcggcgagttcgaggagcgc
ctcaagaagatcatggaggagatccggggtgctggaaacgtgatcctcgtgatcgacgag
gtgcacaccctgatcggcgccggtgccgccgagggcgccatcgatgccgccaacatcctc
aaaccggccctggcccggggcgagctgcagtgcatcggtgccaccaccctggatgagtac
cgcaagcacatcgagcgggatgcggccctggagcggcgtttccagccggtgatggtgggt
gagccctccgtggaggacaccatcgagatcctgcgcggactgaaggagcgttacgaggag
caccaccggctcaagatcgccgacgaggccctgatcgcggcggcgaccctgggcgatcgc
tacatctccgaccgcttccttccggacaaggccatcgacctgatcgatgaggccggcagc
cgcgtgcgcctgatgaactccaagctgcccccggccgccaaggaggtggacaagcagctg
cgcgccgttcagaaacagaaggaagaggccgtgcgcgagcaggacttcaccaaggccggt
gaactccgggaccgcgaggttgaactccgcgagcagatccgctccatcctgcaggcccgc
aaggacgaggagccgggtatcgccgaggccgacggcagcgtcgccaccgtcaccgaagac
ggggagcgctcgccgatggtgtccgaagaggacatcgcccacatcgtggcctcctggacc
ggtgtacccgtccagaagctcaccgagagcgagtcggccaagctgctcaacatggaggaa
accctccaccagcgcctgatcggccaggacgaggcggtcaaggcggtgtcccgtgccatt
cgccgcgcccgggtgggtctgaagaacccgaaccggccgatcgccagcttcatcttctcc
ggacccaccggtgtgggcaagaccgagctcaccaaatccctggcggcctacttcttcggc
agtgaagaggcgatgatccgcctcgacatgtcggaattcatggagcgccacacggtcagc
aagctgatcggctcgcctccgggttacgtgggcttcaacgagggcggtcagctcaccgag
gcggtgcgccgccggccttacaccgtggtgctgttcgacgaaatcgagaaagcccacccc
gatgtgttcaacctgctgctgcagcttctggaagatggtcgtctgaccgattccaagggc
cgcacggtggacttcaagaacaccttgatcatcatgacctcgaacatcggttcgaaggtg
atcgagaagggcggcggtggcctcggcttcgaattctccggcagcgatgctgaagaaacc
cagtacaaccgcatccgctctctggtgaacgaggagctgaagcagtatttccggcctgaa
ttcctcaaccgtctcgacgagatcatcgtcttccgccagctcacccgcgatgaggtgaag
gagatcgccgagatcatgctcaaggaggtcttctcccggatggatgacaagggcatccac
ctctccgtcaccgaggccttcaaggagcggctggtcgaagagggctacaacccctcgtac
ggcgcccggcccctgcgccgcgccgtgatgcgactgctcgaggactccctggccgaagag
ttcctctccggtcgcatcggcgaaggggattctgcggtcgtcgatgtgaacgacgacaag
caggtggtgattctcaagcagaacgccatgcccgccatccccgagctggcgggagccggg
gcctga
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