Cyanobium sp. NIES-981: CBM981_2015
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Entry
CBM981_2015 CDS
T04888
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cyi
Cyanobium sp. NIES-981
Pathway
cyi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cyi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBM981_2015 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cyi02000
]
CBM981_2015 (msbA)
Enzymes [BR:
cyi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CBM981_2015 (msbA)
Transporters [BR:
cyi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CBM981_2015 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA
AAA_21
AAA_22
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
SBO43714
UniProt:
A0A182AQ39
LinkDB
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Position
I:complement(1800133..1801875)
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AA seq
580 aa
AA seq
DB search
MRVYGRFLAYGQRYLWPTFLLALLFNLGYGASTGFVPLVIRYLFDDILPGSDRARLYAAP
AVILGVIVLRAVCQYLGAYLTETVSQSITADLRADLAAKVMELPQAYIDRHPSTTLISRL
LSDVTLVKTGIVDGFSAIFKDSLTLLALVVVAFYQDWLLALIAFILFPVAILPVLRSSKK
VRRHSSRGQSSLARLASYLQEALVGSRVVKIFGMEAYELRRFREENAAVLGAALRTTRAK
LANQPLMELLGAVGFSAVLVYGGEAVIAGTRTTGSFFAFLTSLYLCYAPFKGLAKANATL
QQGVSAAHDLFEILDTPADPVDPPSPVVVSGLQRELRAEAVSFGYGAEPVIHGLSLTIPV
GSTVALVGPSGGGKSTIIDLFCRFYDPGAGRICIDGTDIRDLSLASLRGLISVVDQNTFL
FNDTVANNIAYGHAEASRQAIEAAARAANAHGFITQLPQGYDTLIGENGTLLSGGQRQRI
AIARALIKNAPILLLDEATSALDSASEQVVQEALDRLMSNRTTLVVAHRLSTVVNADRIC
VIEAGRLVESGTHRQLLARGGRYAVLFSTQFSNTEAVTPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtacgggcgcttcctggcctacggccagcgctacctctggcccaccttcctg
ctggcgctgctgttcaatctcggctacggcgcctccaccggcttcgtgccgctggtgatc
cgctatctgttcgacgacatcctgccgggcagtgaccgggcccgcctctatgccgccccc
gccgtgatcctcggcgtgatcgtgctgcgggcggtgtgccagtacctgggggcctacctc
accgaaacggtgagccagtcgatcaccgcggatctgcgcgccgacctggccgccaaggtg
atggagctgccccaggcctacatcgaccgccacccctccaccacgctgatctcgcggctg
ctcagcgatgtgaccctggtgaagacaggcatcgtggatggcttctccgccatcttcaag
gactccctcaccctgctggcgctggtggtggtggccttctaccaggactggctgctggcc
ctgatcgccttcatcctcttcccggtggcgatcctgccggtgctgcgctcctcgaagaag
gtgcggcgccactcgagcaggggccagtcaagcctggcgcggctggccagctacctgcag
gaggcgctggtgggctcccgcgtggtgaagatcttcggcatggaggcctacgagctgcgc
cgcttccgcgaggagaacgccgccgtgctcggcgccgccctgcgcaccacccgcgccaag
ctggccaaccagcccttgatggaactgctgggggcggtgggcttcagtgccgtcctggtg
tacggcggcgaggcggtgatcgcgggcacccgcaccaccggcagtttcttcgccttcctc
acctcgctctacctctgctacgcccccttcaaggggctggccaaggccaatgccaccctc
cagcagggcgtgtccgcggcccacgatctgttcgagatcctcgacacgccggcagacccg
gtggatcctccgagtccggtggtggtgagcgggctgcagcgggagctgcgggccgaggcc
gtgagcttcggctatggggccgagcccgtgatccatggcctcagcctcaccatccccgtg
ggcagcacggtggccctggtggggccgagcggcggcggcaagagcaccatcatcgacctc
ttctgccgcttctacgaccccggcgccggccgcatctgcatcgacggcaccgacatccgc
gacctctccctggcctcgctgcgggggttgatttccgtggtggatcagaacacctttctg
ttcaacgacaccgtggccaacaacatcgcctacggccatgcggaggcgtcgcgccaggcg
atcgaggcggcggcccgggcagccaatgcccatggcttcatcacccagctgccccagggg
tatgacaccctcatcggcgagaacggcaccctcctttccggcggtcagcggcagcgcatc
gccatcgcccgtgccctgatcaagaacgccccgatcctgctgctggatgaggccacttcg
gccctggattcggcctccgagcaggtggtgcaggaggccctcgaccggctgatgagcaac
cgcaccaccttggtggtggcccatcgcctctccacggtggtgaatgcggaccggatctgc
gtgatcgaagcgggtcggctggtggaatccggcacccaccgccagctgctggctcgcggt
ggccgctatgccgtcttattttcgacacaattctcaaacaccgaagcggttacgccccta
tga
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