Citrobacter youngae: CD187_20065
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Entry
CD187_20065 CDS
T05526
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cyo
Citrobacter youngae
Pathway
cyo00470
D-Amino acid metabolism
cyo00550
Peptidoglycan biosynthesis
cyo01100
Metabolic pathways
cyo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD187_20065 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD187_20065 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CD187_20065 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyo01011
]
CD187_20065 (ddl)
Enzymes [BR:
cyo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CD187_20065 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cyo01011
]
Precursor biosynthesis
Amino acid ligase
CD187_20065 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AWV28366
LinkDB
All DBs
Position
complement(4086470..4087390)
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AA seq
306 aa
AA seq
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MADKIAVLLGGTSAERDVSQNSGAAVLAGLREGGVDAHPIDPKEVDVTLLKSMGFQKVFI
ALHGRGGEDGTLQGMLELIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDEVVTEISALGLPLIVKPSREGSSVGMSKVEEENALHGALALAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLSDETQYFCPAGLEVEQEARLQEL
VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGLSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaatcgcggtcctgttagggggaacctccgcagagcgtgacgtttcgcag
aattccggcgcggccgtactggcagggttacgcgaaggtggtgtggatgctcatccaatt
gacccaaaagaggtcgatgtcacgcttttgaaatcgatgggttttcaaaaggtgtttatt
gcgctgcacggtcgtggtggtgaagatggcacgttgcagggcatgctggagctgattgga
ctgccgtacaccggtagtggcgtcatggcttctgcgatttcgatggacaaactgcgcagc
aaactgttgtggcagggggctggtttaccggtcgcgccttgggtcgcattgacccgcgct
gagttcgaaaaaggtcttagtgatgaggtggttacggagatttctgcgctaggtttgccg
ctgattgtgaagcccagccgtgaaggctcaagcgtagggatgtcaaaagttgaagaagaa
aatgctttgcatggtgcattagcattggcttttcagcatgatgaagaagtactgatcgaa
aaatggctcagtggcccggaatttacagttgcgatacttggtgaagaaattttaccgtca
atacgtatccaacctgcgggaaccttctatgattatgaggcgaagtatctctctgatgag
acacaatatttctgccctgccggtctggaagtcgaacaagaggcccgtttacaggaatta
gtcctgaaagcgtggaccacattgggctgtaaaggttggggtcgcattgacgtcatgctg
gacagcgatggccagttttatctgctggaagcgaatacctctccgggtatgaccagccac
agtctggtgccgatggcggcgcgtcaggcgggcctgagcttctcgcagttggtggtaaga
attctggagttggcggactga
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