Crocosphaera subtropica: cce_0484
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Entry
cce_0484 CDS
T00686
Symbol
recJ1
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyt
Crocosphaera subtropica
Pathway
cyt03410
Base excision repair
cyt03430
Mismatch repair
cyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
cce_0484 (recJ1)
03430 Mismatch repair
cce_0484 (recJ1)
03440 Homologous recombination
cce_0484 (recJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyt03400
]
cce_0484 (recJ1)
DNA repair and recombination proteins [BR:
cyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
cce_0484 (recJ1)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
cce_0484 (recJ1)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
cce_0484 (recJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACB49835
CyanoBase:
cce_0484
UniProt:
B1WNJ3
LinkDB
All DBs
Position
complement(483668..485632)
Genome browser
AA seq
654 aa
AA seq
DB search
MKLPDQRWYIASPNPDQVKMLVAETGLSPLLAQVILNRGIDSPNLAQVYINPEVETLPDP
LDEFPDLLSSIELLKEAIEIGEKIAICGDYDADGMTSTSLLLRALTHLGGDAYYEIPSRM
KDGYGINERIVEKFAEEGVGVVLTVDNGIAAYEPIKRAIELGLTVIITDHHDLPEKLPPA
DAILNPKLLSIHSPYRGLAGVGVAYILAVTLAEQFNKTEEIIDSLLELFTLGTIADLAPL
VGVNRRWLKKGLKQLPNSQLAGIQALMQVAGVSEEQKQLKPDDIGFKLGPRINAVGRIGD
PQTAIELLTTDDPGIALERAMQCEQINGKRKGLCEEIEKEAIHLIKTTPINYKKDRVLVV
INHKWHHGVIGIVASRLVERYGVPVFIGTYEEDDPSKIRGSARGIEEFNIFEALVYCDDL
LGKYGGHKAAGGFGLKSNNLIAFKERLSQFAHQLLEPHHIKPLVKIDGEANFKQLNAQLY
QHIDSLQPWGIENAFPVFWTPNVKILEQRTVGKNHLKLVLGQEDGQEMKAIAWRFGSYFP
LPKRLDIAYKLTENYWNGTVNIELEIVGVRLPAGTTIQPKNTFTYQGKDYICHYFKQEKE
LRIKNAQGKVLAVRKGQQKGLLGINRQEAKEVDVTQNPYFDIIKAAMNTLNLTK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaccagatcaacggtggtatattgcctctcctaaccccgatcaagtaaaaatg
ttagtagcagaaacgggactatctcctttactcgctcaagtcattttaaatcgaggaata
gatagtcctaatttagcacaagtttatattaacccagaggtggaaacgttacccgatcct
ttggatgaatttcctgatttactttctagtattgaactcttaaaagaagctattgaaata
ggagaaaaaattgccatttgtggggactatgatgctgatggtatgactagcacgtcttta
ttattaagggctttaactcatttaggaggagatgcttattatgaaattccgagccggatg
aaggacggttatgggattaatgaaagaattgtagaaaagtttgctgaagagggtgttggg
gttgttttgaccgttgataatggcattgctgcctatgaacctatcaaaagagcaatagaa
ttagggttaacggttatcattacggatcatcatgatttacctgaaaagttgccccctgct
gatgcaattttaaaccctaaattattatcgattcattctccttatcggggcttagctggt
gtgggagttgcttatattttagcggtaactcttgctgaacaatttaacaaaactgaggaa
attattgattcattattagagttatttaccctaggaacgatcgcagatttagctccttta
gttggggttaatcgtcgttggttaaaaaaaggattaaaacagttacctaattcacaacta
gcaggtattcaagccttaatgcaagtcgcaggggttagcgaagaacaaaaacaattaaaa
ccggatgatattggctttaaattagggccaagaattaatgcagtgggacgaattggtgat
ccacaaacggctattgaactattaacaacggatgatccaggaattgcactagaaagggca
atgcaatgtgaacaaattaatggtaaacggaaaggtctatgtgaagaaattgaaaaagaa
gcgattcatttaattaaaacaacgcctattaattataaaaaagatcgagtgttagtggtg
attaatcataaatggcatcacggggtaattgggattgttgcctctcgtttagttgagcgt
tatggcgttcctgtttttattggtacttatgaagaagatgatcctagtaaaattaggggt
tcagccagaggaattgaagaatttaatatctttgaagctttggtttattgtgatgattta
ttgggtaaatatggaggacacaaagcagccggcggattcggtttaaaaagtaacaattta
atagcttttaaagaaagattgagtcagtttgcacatcaattattagaaccccatcacatt
aaacctttagttaaaattgatggagaagcgaattttaaacagttaaatgctcagttatat
caacatattgatagtttacaaccttggggcatcgaaaatgcgtttcctgtgttttggact
cctaatgttaaaatattagaacaaagaaccgtcggaaaaaatcatttaaaattagtattg
ggtcaagaagatggtcaagaaatgaaagcgatcgcttggcggtttggttcctattttccc
ctacctaaacggttggatattgcctataaattgacagaaaattattggaatggtaccgtt
aatatagaattagaaatagtaggggttcgtttgcctgctggtactacaattcagcctaaa
aatacttttacttatcaaggaaaagactatatttgtcactattttaaacaggaaaaagaa
ttgagaattaaaaatgctcaaggtaaagtattagcggtacgcaaaggacaacaaaaagga
ttattagggattaaccgtcaagaagctaaagaagttgatgttactcaaaacccctatttt
gatataataaaagcagctatgaacactttaaatttaacaaaataa
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