Clavibacter zhangzhiyongii: H9X71_07420
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Entry
H9X71_07420 CDS
T07408
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
czh
Clavibacter zhangzhiyongii
Pathway
czh03030
DNA replication
czh03430
Mismatch repair
czh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
czh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9X71_07420 (holA)
03430 Mismatch repair
H9X71_07420 (holA)
03440 Homologous recombination
H9X71_07420 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
czh03032
]
H9X71_07420 (holA)
03400 DNA repair and recombination proteins [BR:
czh03400
]
H9X71_07420 (holA)
Enzymes [BR:
czh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9X71_07420 (holA)
DNA replication proteins [BR:
czh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9X71_07420 (holA)
DNA repair and recombination proteins [BR:
czh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9X71_07420 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QOD42486
UniProt:
A0A7L7YYG5
LinkDB
All DBs
Position
1557777..1558805
Genome browser
AA seq
342 aa
AA seq
DB search
MATRTSRGTATKASAAIPQLAWDAVRPAPIVLVSGTESLLADRAMRRLRDILTAEDPSIE
VSDIEADSYAPGELITLASPSLFAEPRLIRVVNVEKCSDQFLLDAVAYLDSPADDTYVVL
RHAGGVRGKKLLDAVRAGTGGGIEIVCAELKKDSEKHDFAVAEFRAAKRSITPGAVRQLV
AAFQDDVSELASACQQLISDTAHEITEVTVEQYYGGRVEINAFAVADSAIAGRSGEALVL
LRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGPSGQLASKLGMAPWQVDRARRDLQLWD
DAGLGRAVEALAEADAQVKGGGRDPVYSLERMVRTVASRGRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggacctcccgcggcaccgcgacgaaggcgtccgccgccatcccgcagctc
gcgtgggacgccgtgcggcccgcgcccatcgtcctcgtgtccggcaccgagtccctcctg
gccgaccgggcgatgcgtcgcctccgcgacatcctcacggcggaggacccgagcatcgag
gtctccgacatcgaggccgactcctacgcgcccggtgagctcatcaccctggcgagcccc
tcgctcttcgccgagccgcgcctcatccgcgtcgtcaacgtcgagaagtgctccgaccag
ttcctgctcgacgccgtggcctacctcgactcgccggccgacgacacctacgtcgtcctc
cggcacgccgggggagtgcgcgggaagaagctgctcgacgcggtgcgcgcgggcacgggc
ggcggcatcgagatcgtctgcgcggagctgaagaaggacagcgagaagcacgacttcgcc
gtggccgaattccgcgccgccaagcgatccatcacgccgggcgcggtccggcagctcgtc
gccgcgttccaggacgacgtgagcgagctcgcgtccgcgtgccagcagctcatctcggac
accgcgcacgagatcaccgaggtgaccgtcgagcagtactacggcggccgggtcgagatc
aacgcgttcgccgtggcggactccgccatcgcgggccgcagcggggaggcgctcgtgctg
ctccggcacgcgctcacgtcgggagcggaccccgtgccgctgatcgccgcgttcgcgatg
aagatccgcacgatggccaaggtctcgggcgtctccggcccgtcggggcagctcgcgtcg
aagctcggcatggcgccgtggcaggtcgaccgggcccgccgcgacctgcagctctgggac
gacgccgggctcggccgcgccgtcgaggccctcgcggaggcggacgcgcaggtcaagggc
ggcgggcgggatcccgtctactcgctcgagcggatggtgcgcacggtcgcctcccgcggt
cgcgactga
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