Delftia acidovorans: Daci_0339
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Entry
Daci_0339 CDS
T00620
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dac
Delftia acidovorans
Pathway
dac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Daci_0339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_0339
Enzymes [BR:
dac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Daci_0339
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Daci_0339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABX32985
UniProt:
A9BR30
LinkDB
All DBs
Position
complement(378736..379539)
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AA seq
267 aa
AA seq
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MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY
AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG
ELRQTAKFRFLAEMHEHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEERE
WMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARTEHIYKDVKFSDHAPVTIGYDMKV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattgaccagcctcaacctcaacggcatccgctcggcctcgaccaagggcgtc
gaagcctggatcgaggccactgcgccggattgtatttgcgtgcaggaaatcaaggcccag
gccgccgacatgaccggacgcttcgagctgctggccggcctgcgcggccacttccactac
gccgagaaaaagggctactcgggcgtgggcgtctacagccgccacgagcccagcgatgtc
gtggtcggcttcggctcgcacgagttcgacgccgagggccgctatgtggaggcgcgcttc
gacacgcccgcgcgcaagctgtccatcatcagcgcctactttcccagcggcagctcgggc
gaactgcgccagacggccaagttccgcttcctggccgaaatgcacgagcacctgatgcgc
atgaagggcgagcgcgagttcatcctgtgcggcgacatcaacatcgcccaccagcagatc
gacctcaagaactggcgcagcaaccagaaaaacagcggtttcacgcccgaagagcgcgag
tggatgacaaagttgttacacaaaactgatcccacgggcggtcttgtggacgtttatcgc
ctgctccagcccgacaccacggacgcctgctacacatggtggagcaaccgaggccaggcc
tatgccaacaacgtgggatggcgcctggactaccacctggccaccccggccatcgccgca
ctggcacgcaccgagcacatctacaaggatgtgaagttctcggaccatgcgccggtgacc
atcggctatgacatgaaggtgtga
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