Desulfosporosinus acidiphilus: Desaci_1209
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Entry
Desaci_1209 CDS
T02148
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03420
Nucleotide excision repair
dai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desaci_1209
03430 Mismatch repair
Desaci_1209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_1209
Enzymes [BR:
dai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desaci_1209
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desaci_1209
MMR (mismatch excision repair)
Other MMR factors
Desaci_1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFM40241
UniProt:
I4D367
LinkDB
All DBs
Position
1297340..1299601
Genome browser
AA seq
753 aa
AA seq
DB search
MYRLDDLNSVQREAAEHQEGPLLILAGAGSGKTRVLTYRIAHLIARGVDPGDILAITFTN
KAAKEMRDRVTTLVGSEGRGLWVSTFHSACVRILRRDIEHLPGYTRNFVIYDAGDQLALI
KGCLKEKNLDEKKFSPRGVASVISDAKNKLLDPEGFAVQASDYFQSKVVDLYRDYQKKLR
TNNALDFDDIIMLTVKLFRENDRVLDYYQEKFRYILVDEYQDTNHAQYMLIKLLASRYRN
LCVVGDDDQSVYGWRGADIQNILDFERDYPEAKVIKLEQNYRSTQKILDAANAVVRNNEG
RKEKSLWTENSSGQPIVCYVSNDERDEARYVVERIQRLHELEGRPYSDFTVLYRTNAQSR
ILEEQLMKAALPYRIFSGLKFYQRLEIKDMLAYLRLIYNPSDQVSFARVLNVPKRGLGES
TLEKILEYADEQGMPVLDAILEADYIPELTARAKKPLLAFAHLMQGLVEFSKNATVTELV
KEILNKTGYQAILEADSSPEAEARLENLLEFLSVTTEFDEKAAQSETEGEEEQILGGVSG
FLEQVSLVADIDELDPAEESIALMTMHSAKGLEYPVVFVVGMEEGIFPSGRSFLDPSELE
EERRLCYVAITRAREKLYLCNSEMRMLYGKTQYNPPSRFLEEIPSELMTDIDPLDPPKLR
LNTSPKSFQRQEGKPDRRIPLGSGSWEKDFGSPVVIKGGEAHHVGEKVEHVKFGRGIIVS
IKGEGNQAELTIVFDGGIGIKKLLAEYAKLTKL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggttggacgatttgaattcagtacaaagggaagctgctgagcatcaggaaggg
ccgcttcttattctggccggtgcaggatcaggaaagactcgcgtgcttacttaccgaatt
gctcatttgattgctcggggtgtcgatccaggcgatatattagcaattacgtttacgaat
aaagcagctaaggagatgcgggacagggtaacaaccctcgtaggcagtgaaggacgagga
ttatgggtcagcaccttccactcagcctgtgtacgcattttgcggcgggatatcgagcat
ctgccgggttatacccggaattttgtgatctacgatgcgggagatcaactggctttgatc
aaaggatgcttaaaggaaaagaatctggatgaaaagaaattttccccgcgtggtgtagct
tcggtgattagtgatgccaaaaataaactcctggaccctgaaggatttgctgtccaggcc
agcgattattttcagagcaaagttgttgatttgtatcgggattatcagaaaaaactcaga
acgaataatgctctggattttgatgatattattatgcttacggttaaactgttcagagaa
aatgacagggttttggattattatcaggagaaattccgttatattttggtggatgaatat
caggataccaatcatgcccaatacatgctgatcaagctgttggccagccgttaccgcaat
ctttgtgtggtaggggacgatgaccagtccgtttatggctggcgcggggctgatattcaa
aacatccttgattttgagcgggattaccctgaagctaaggttatcaagcttgagcagaat
tatcggtctactcaaaaaattcttgatgctgccaatgccgttgtcaggaacaatgaggga
cgcaaagaaaaatctctctggacggagaattcctcaggacagccaatcgtttgttatgtc
agtaatgacgaacgggatgaagccaggtatgtggtagaacggattcagcgtttgcatgaa
ctggaaggtcgtccctacagtgattttacagttctttatcgaaccaatgcccaatctcgg
atactggaagaacagttgatgaaagccgccctgccttatcgaattttttcgggtttaaag
ttttaccaacgtttagagatcaaagatatgttagcctatctgcggcttatctataaccct
tcagaccaagtaagttttgcccgggtgcttaatgttcctaaacggggcctgggagaaagt
actctggagaaaattctggaatatgccgacgaacaaggaatgcctgtcttggacgctatt
ttggaagcagactatattccggaattaacagcccgggctaagaaaccattgttggccttt
gcccatctgatgcaaggtttagttgagttttcgaaaaatgccaccgttacagagttagtc
aaggagattttgaataaaacgggttaccaggcgattctcgaagcagatagttcaccggaa
gcagaagcccgcttggaaaacttgttagagtttctttccgtcacaacggagttcgatgaa
aaagctgctcaatctgaaaccgaaggggaggaagaacagatccttggcggagtcagcggc
tttttagagcaagtatcgctggtcgctgacatagacgaactggatcctgcagaagaatcc
attgccttaatgaccatgcacagcgctaaaggtctggaatatcctgtcgttttcgtggta
ggcatggaagagggcatctttcccagcggacgttcctttcttgacccttcagagttggag
gaggaacggaggctgtgctatgtagctattacacgggcacgtgaaaaactgtacttgtgc
aattcagaaatgcgtatgctctatggcaaaacccagtataatccaccttcgcggttttta
gaggagatcccgtcggagctgatgacggatatcgatccactcgatccgcctaaactgcgt
ttaaatacttcacccaaatcatttcagagacaggagggtaaaccagatcggagaattcct
ttagggtccggttcctgggagaaagattttggcagcccggtggtcattaaaggaggtgag
gctcatcacgtaggagaaaaggttgagcatgttaaattcggacgaggaataatagtctca
attaagggtgaaggaaatcaggcagaattgacaattgtatttgatggtggaattggaatt
aaaaaactcttggcagagtacgccaaacttaccaaactctaa
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