Diachasma alloeum: 107044127
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Entry
107044127 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107044127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107044127
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107044127
Spliceosome [BR:
dam03041
]
Complex C
Other components
Step II factors
107044127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
RSRP
nSTAND3
AAA_30
AAA_16
T2SSE
PhoH
Motif
Other DBs
NCBI-GeneID:
107044127
NCBI-ProteinID:
XP_015121377
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MEIDEVAELERLSLVSKICAELENHFGQNDDHKILAQFIIHLSKKNTTFETFKKALMENG
ADTFSDSFIANILRIIQHMKPLKLVSDPVIKTKQDELAHKFPGLAAANQAPIPADDVDIV
EDAMASLEEFAPSSLQSNGSEAVTARKCSQSPEKTENSKRERSKDRKHRSRSPSRRSRRH
KSRSRDRSRHRNRGSRRSRDRSRSRDRERRRRRSPEPDRKYNSRDHYSRDSKHKRSRSRS
RSNEEVIPMDPEVGKVYTGKVANVVQFGCFVQLEGLRRRSEGLVHISQLRREGRVASASD
VVSKGQKVYVKVLSVAGQKISLSMKDVDQDSGRDLNPILAISRAEEDEKHLRNPDRPTSL
LELEGNLDEDETYSRPRVQRLSSPEKWEIKQMLAASCIDRSELPEFDMETGVLPREDDEE
EDVEIELVEEEPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQR
EQEMDSAPAGLNKNWVDPLPDAESRQVASNMRGIGLQTQDLPEWKKHVIGGKKSSFGKKT
NLTLLEQRQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTSRGKIG
CSQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETNIKYMTDGMLLRECLVDL
DLKTYSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPI
FTIPGRTFEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILY
ERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYV
VDPGFVKQKVYNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLP
TPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLT
RLGRRMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQAFADQKKAK
FNQTEGDHLTLLAVYNSWRNNKFSNPWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVV
SAAKNTVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL
VQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS
RVRRRRN
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagattgacgaggtagcggagctagagcgcctctctttggtctcaaaaatctgtgca
gagttagaaaaccattttggccagaatgacgatcacaaaatcctcgctcaattcataatt
catctgtccaagaaaaacacaaccttcgagaccttcaaaaaagctctcatggaaaatgga
gcagacacattctcggactccttcatcgccaacattctgcgtataatccagcacatgaag
cccctaaaattggtttcagatcccgtgatcaaaaccaaacaagacgagctggcacataaa
ttcccaggcttagcagcagcaaaccaggcccccatacccgctgacgatgtggacattgtt
gaagacgcaatggcatctctggaggaattcgcgccttcttcattacaaagcaatggctca
gaagctgtaacagcgcggaaatgcagtcaatcaccagagaaaacggagaactctaaacgc
gagcgttcaaaagacaggaaacacaggtctagaagtccctctcgacgaagcagaaggcac
aaatcccgctctcgtgaccgatcaagacatcgaaatcggggcagtcgacgttctcgtgat
cgttccaggtccagggaccgagagcgacgtcgtcgcagatccccagaaccggatcgtaaa
tacaactctcgcgatcattactccagagactccaaacacaaacgaagtcgttcacgttca
cgttcgaacgaagaagttatccctatggatccagaggtgggtaaagtctacactggaaag
gtagcaaatgtcgtccagtttggatgtttcgttcaactggagggtctcaggcgaagatca
gagggtctagtccacatttctcagttgaggcgggaggggagagtggccagtgcaagtgac
gtcgtctccaagggtcagaaagtctacgtgaaagttctcagtgtggctggacagaagatc
tctttgagcatgaaagacgtggatcaggactctggacgtgatttaaatccaatccttgcg
attagcagagctgaagaggatgaaaaacacttgagaaatccagatcgaccgacttccttg
ctagaacttgagggaaacctcgatgaggacgaaacctattctcgacctcgagtgcaacgt
ctctcatctcctgaaaaatgggaaataaagcagatgttagctgcctcatgcattgacagg
agtgaacttccagaattcgacatggaaactggagttttacctcgtgaagacgacgaagag
gaagacgtggaaattgaactcgtggaggaagaacctccattcctccatgggcatggtcgt
gccctgggtgatctcagtccagtaaggattgtcaagaaccctgatggatccttggctcaa
gctgctatgatgcagagtgcattagctaaggaacgaagggagcaaaagatgctgcaacga
gagcaggaaatggactctgcacctgcaggattgaataaaaactgggtggatccattgcca
gatgctgagagtcgtcaagttgcttccaacatgcggggaattggactccagactcaggac
cttcctgaatggaaaaaacacgtgatcgggggtaaaaaatcttccttcgggaaaaagacg
aatctcacactattggagcaacgtcagagcctccctatctacaaacttagggacgattta
gtgaaagctgtcactgataaccagattttaatcgtcattggagaaactggatctggaaaa
actacacaaataactcagtatttagcagaagctggattcacatctcgaggaaaaattggt
tgcagtcagcctaggagagtagcagccatgtcagtagctaagagagttgctgaagagttt
ggatgtcgtctaggacaggaagtgggatatacaattcgatttgaagattgtacgagtcct
gaaacaaatataaaatacatgacagacggtatgttacttcgagaatgtcttgtggatctg
gatctgaaaacgtactcagtaattatgttggatgaggctcatgaacgtaccattcacact
gacgttttgtttggattattgaaacaggctgtgggacgtcgtccagaccttaaactcatc
gtcaccagtgcaactctagatgctgtcaagttctctcagtacttcttcgaggctccaatc
tttacgattcctggaagaacattcgaggttgaagtgatgtatactaaagagcctgaaact
gattatcttgatgctgctctgataacagtgatgcagattcatttacgagaacctcctggt
gacattctactgttcttgactggtcaggaggaaatcgacacagcttgtgaaattctttat
gaaagaatgaagtcactgggtcctgacgttcctgaattaatcatactgccagtttactcg
gcccttccttccgaaatgcagaccaggatcttcgaacctgctccacctggatcaagaaaa
gtagtaatagctacaaatattgcagaaactagtttaacaattgatggaatttattacgta
gtcgacccagggtttgttaaacagaaagtttacaattctaaaactggaatggacagtctc
attgtcactccgatcagtcaggccgctgccaaacaacgagctggaagggctggacgtact
ggacctggaaaatgttatcgattgtacacagaacgagcctacagagacgaaatgttacca
actccagttccagagattcagagaacgaatttagcaacgactgtactacaattgaaaacc
atgggcatcaatgatttattacattttgattttatggatgctccacctgttgagtccctc
atcatggctctggaatcattacacagtctcagtgctcttgataatgagggattattgaca
agactggggaggaggatggcagaatttccactggaacctaatttatcaaaaatgctgatc
atgagtgttcatcttcagtgctctgatgaaatattaacaattgtcagtatgttgtcagta
caaaatgtattctatagacccaaggacaagcaggcttttgcagatcaaaagaaagcaaaa
ttcaatcagactgaaggagaccatttaactcttcttgctgtttataattcctggagaaat
aataagtttagtaatccctggtgttatgagaatttcgtacagattaggactttgaaacga
gcacaggatgtaaggaaacagctgctgggcatcatggataggcataagttggatgttgta
tctgctgcgaagaatacggtaaggattcagaaggctgtctgctcaggattcttcaggaat
gctgccaagaaggatccccaggagggttacagaacacttgttgatagtcaagtggtttat
attcatcctagtagtgctttgttcaatagacaacccgagtgggtgatttatcatgagctc
gtgcagacgacgaaggagtatatgagggaagtgacgactattgatcctaaatggttggtg
gagtttgctcctgctttcttcaaatttagtgatccaacaaagttgagtaaattcaagaag
aatcaacgtctcgagcctttgtataataaatatgaagagcctaatgcctggaggatatcc
agagttcgacgacgacgaaattaa
DBGET
integrated database retrieval system
