Diachasma alloeum: 107048316
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Entry
107048316 CDS
T07663
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dam
Diachasma alloeum
Pathway
dam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107048316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107048316
03009 Ribosome biogenesis [BR:
dam03009
]
107048316
03036 Chromosome and associated proteins [BR:
dam03036
]
107048316
Enzymes [BR:
dam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107048316
Messenger RNA biogenesis [BR:
dam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107048316
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
90S particles
RNase
107048316
Prokaryotic type
rRNA processing factors
107048316
Chromosome and associated proteins [BR:
dam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107048316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
ROS_MUCR
Motif
Other DBs
NCBI-GeneID:
107048316
NCBI-ProteinID:
XP_015126931
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MTSNNPGEQYSWMSGQPGSEYYSNPSIPYPPPDFSQPPPNFRVPPPNFPNYQHNNSYDKP
PSDNYVYPQSGGCYHQNYNNYTPYTYQGYANTSASPGNDSTQQLRWGTSNVDQWSRSQGD
SDQSLNNAPKTGGWKARTAAGDWNYQSSGAVNRPDHSKRTDNSSRYDKPREEWRNHGEKS
GPNKHWPKGSNSSRGMPVDRYRRSDRNHYYKNEDYRRSSLRDESGSRERTRSRERSSVSD
RSRKRSRSVEADSSRASTAGGSKTPVKPKRELTERELLLEKYRRNYCATSRDIEKKMDEL
GPDGILECERKAWTRTAPADLYYNRDESNPRIMRGTPKLQELCDIFKRVLLDRASVTRAS
QPPYEPPVRKTRRRVCRHKSEICSSDSSSSDGDSSMDEVDRTMEELMAKKEHPQRLHKEM
WFNDPGEMNDGPLCRCSAKSRRSGIRHGIYAGEGTINRCELNSNNADKLFHYRITISPPT
NFLTKTPTIIKHDEHEFIFEGFSMLSHFPLVKLPTCKVIRFNIEYTILYIEEKLPENFTV
QELDYFQNYLFKEILELMDFDLHPAQDTSGCGQFHFMPRFVRDLPDKGQEILSMNEVLNY
LIKSSTRLIEEEDLPRLIEMPQYKWQNFADEVKGMVVTYPGKKPCSVRVDQLDRNQEDDQ
TNDGTVYPAIVHFGIRPPQLSYAGNADYQKAWRDYVKFRHLLANMPKPSFESKRKLEAKE
NKLQELRTQSKMKRDVTVDMSSEGFYRTGIMCDIVQHAMLIPVLVCHLRFHKSLDNLECT
LKYKFKNRYLLQLALTHPSYRENFGTNPDHARNSLTNCGISQPEYGDRRIHYMNTRKRGI
NTLINIMSRFGARRETESSIAHNERLEFLGDAVVEFLSSIHLFHMFPNLEEGGLATYRAA
IVQNQHLAVLAEKLHLEQYMLYAHGSDLCHDLELKHAMANCFEALMGSLFLDGGIEVADR
VFGETLFQNECDLLSVWVNYPRHPLQEQEPTGDRQWISSFEFLQKLTKFEETIGVDFTHI
RLLARAFTDRSIGYTNLTLGSNQRLEFLGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSL
VNNKTQAVVCDDLGMTQYALYGNQKAELKTKDRADLLEAFLGALYVDKGLEACKVVCNVC
FFPRLQDFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRVYTVAVY
FRGKRLAKASGHSIQEAEMNSAKEALEKSQDLFPQLDHQKRVIAKSVKMQQWPRRVRTRS
RHSDKSDDSDSAQSRKRRSRSRDRGGDRAERTERRDDHRRSRSSYD
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaataatccaggagagcaatattcgtggatgtcaggccagccgggctcagaa
tactattcgaatccctcgattccctaccctccacctgacttttcacagccacccccaaat
ttccgagtgccacctcccaattttccaaactatcagcacaacaattcgtacgataaaccc
cccagtgataattacgtttaccctcagagtggcggctgctaccaccagaattacaataat
tacactccgtacacgtatcaaggttatgcaaacacttcagcatctcctgggaatgattca
acacagcagcttcggtggggaacaagcaatgtcgatcagtggagcagaagtcagggggat
tctgatcaatcattgaacaacgccccaaagactgggggctggaaggccaggactgctgct
ggcgactggaattatcaatcttctggggcagtaaatcgtcctgatcattctaaacgcacc
gataatagtagcaggtatgacaagccacgagaggaatggagaaaccacggagagaagtcg
ggccctaataaacactggcccaagggctccaactctagtaggggaatgccagttgacagg
tacaggagatcggacaggaatcattactacaaaaacgaggattacaggaggtcgtccttg
agagatgagtcagggtctcgcgagaggacacgaagcagggagagatcgagtgtcagtgat
agatccagaaaacgatcgagatctgtggaggcggattcctccagggcttccactgctggc
ggcagcaaaactccggtgaaacccaagagggaactgactgagagggaattgttactggaa
aaatacagacgaaattactgcgctacaagtcgtgatattgagaaaaaaatggacgagcta
ggtccagatgggatcctagagtgcgagagaaaggcctggacccgaacagctccagcagac
ctctattacaacagagacgagagtaatccaagaataatgagaggaacgccaaagctccaa
gaattatgcgacatctttaaacgagtccttctagatagagcctcagttacacgagcgagt
cagccaccgtatgagccaccagtgcgtaaaaccagacgacgagtttgcaggcacaaatca
gagatatgcagcagtgacagtagttcctcagatggtgacagttcgatggacgaagttgac
aggacaatggaagaactcatggccaagaaggagcacccacagagattacacaaagaaatg
tggttcaacgatccaggggaaatgaacgatggccccttatgcagatgcagtgccaagtca
agaagatctggaataaggcatggaatttacgctggtgaaggtacgataaaccgttgcgag
ttgaactccaacaatgcagacaaattattccactatcgaataaccataagtccccccaca
aatttcttgaccaaaaccccgacaatcatcaaacatgacgagcatgaattcatattcgag
ggtttctcaatgctctctcattttccactggtaaaattgcccacctgcaaagtcatcaga
ttcaacatcgaatacactattctctacattgaggaaaagttgccggagaattttactgtt
caggagttggattatttccagaattacctcttcaaggagatattagagctcatggacttt
gatctgcacccagcacaggacacaagtggctgtggacaatttcactttatgcccagattc
gtcagggatttgcctgacaagggccaagaaattttatccatgaatgaggtgttaaattat
ttgataaaaagtagcacaagattgattgaggaggaggatctcccaaggctcattgagatg
ccccagtacaagtggcagaattttgctgacgaagtcaaaggaatggtggttacatatccc
ggcaagaagccatgtagtgtaagagtagatcagctcgacagaaatcaagaggacgatcaa
acgaatgatggaactgtttacccagcaatcgttcactttggaattagaccccctcagttg
agctacgctggtaatgctgattaccaaaaagcctggagggattacgtcaaattccgtcac
ctcctggccaacatgcccaagccatccttcgagagcaagagaaaactcgaagctaaagag
aataaactccaggaattgaggacccagagtaaaatgaagagagatgtgactgtcgacatg
agctccgagggtttctatcgaactggaataatgtgtgacattgtccaacacgccatgctg
attcccgttctagtctgccatctgcgattccacaagtccctggacaatttggagtgcacc
ctgaagtacaaatttaagaacagatatttattgcaactggcactgacgcatcccagctat
cgagagaacttcggaacaaacccagatcacgcaagaaattcattaacaaattgcggtatc
agccagccagagtacggagacaggcgaattcactacatgaatactcgcaaacggggcatc
aatactctgataaacatcatgtcgagattcggcgccagaagagaaacagaatcatcaatc
gctcataacgagagactggagttccttggagatgctgtggtggaatttttgtcttcaatt
catctcttccacatgtttccgaatctcgaggagggtgggctggccacttacagagcagct
atcgttcagaatcagcatctagctgtactcgctgaaaaattacacttggaacagtacatg
ctgtacgcacacggcagtgatctctgccacgatttggagctcaagcacgcaatggccaat
tgtttcgaggccctgatgggctcgttgtttctcgacggtggcattgaggtggccgaccga
gtattcggcgagacattatttcagaacgaatgtgatttgctgtcagtttgggtgaactac
ccgaggcatcccctccaagagcaggagccaacgggcgatagacagtggatctccagcttt
gaattcctccagaaactcaccaagttcgaggaaaccattggggtggattttacccacatc
agattgctggcaagagcattcaccgatcgaagtattggctacactaatttgacacttggg
tctaatcaaagattggagtttctgggtgacactgtactccagcttatagtctctgaatac
ctctacaaattctttcctgagcatcatgaaggacatttgtcattgttgagaagctctttg
gtgaataataagacgcaggcagtcgtctgtgatgatttgggcatgacgcagtatgcattg
tatggaaatcagaaggcagagctcaagactaaggacagggcggatttattggaggccttc
cttggtgcattgtacgtggataagggcctggaggcctgcaaagttgtctgtaatgtctgc
ttcttccctcgtcttcaggactttattatgaatcaggactggaatgatcccaagagtaaa
ctgcagcagtgttgtttaacgttgagaacaatggatggaggtgagcctgatattcctgtg
tacaaggtgatcgagtgcaaaggccctaccaatacgagagtctacacagtggctgtttat
tttcggggaaagagactggccaaggcttctggacatagtatccaagaggctgagatgaat
tcggctaaggaggcacttgaaaagtcgcaggatcttttccctcagctggatcatcagaag
agggtcattgctaagagtgtcaagatgcagcagtggcctagaagggtacggacaaggtcg
aggcattccgataaatctgatgattctgattctgcccagagtagaaagagaaggagcaga
agcagggataggggaggggatagagctgagagaaccgagaggagggatgatcatcggaga
tcccgtagcagttatgactag
DBGET
integrated database retrieval system
